IB Exam Review Notes
Water and Life (Unit 1)
Water (A1.1)
- A1.1.1 – Water as the Medium for Life
- First cells originated in water (oceans).
- Most life processes occur in water as a solvent.
- A membrane separates internal water (cytoplasm) from the external environment.
Hydrogen Bonding (A1.1.2)
- A1.1.2 – Hydrogen Bonds
- Hydrogen bonds are a consequence of polar covalent bonds within water molecules.
- Polar covalent bonds form due to unequal sharing of electrons.
- Allows for hydrogen bonding between water molecules.
Cohesion (A1.1.3)
- A1.1.3 – Cohesion
- Cohesion of water molecules is due to hydrogen bonding.
- Consequences for organisms:
- Transport of water under tension in the xylem (cohesion-tension theory).
- Surface tension as habitats.
Adhesion (A1.1.4)
- A1.1.4 – Adhesion
- Adhesion of water to polar or charged materials.
- Impacts for organisms:
- Capillary action (water flowing against gravity).
- Xylem (transpiration stream).
- Soil (from the deeper water table).
Solvent Properties (A1.1.5)
- A1.1.5 – Solvent Properties
- Solvent properties of water are linked to its role as a medium for metabolism and transport in plants and animals.
- Hydrophilic substances dissolve in water, allowing for transport (e.g., in blood or the xylem).
- Enzymes catalyze reactions in aqueous solutions (metabolism).
- Hydrophobic substances do not dissolve in water.
Physical Properties (A1.1.6)
- A1.1.6 – Physical Properties
- Physical properties of water and consequences for aquatic animals:
- Buoyancy (enables floating).
- Viscosity (direct correlation with solute concentration).
- Thermal conductivity (absorbing and transferring heat).
- Specific heat capacity (absorbs/releases heat without changing temperatures).
- Physical properties of water and consequences for aquatic animals:
Origin of Water on Earth (HL) (A1.1.7, A1.1.8)
- A1.1.7 – Origin of Water
- Abundance of water on Earth has allowed life to evolve.
- Extraplanetary origin: asteroids.
- Retention due to gravity and temperatures low enough for water to be a liquid.
- A1.1.8 – Extraterrestrial Life
- Relationship between the search for extraterrestrial life and the presence of water.
- The position of Earth in relation to the Sun is in the Goldilocks zone (the habitable zone).
- Allows water to exist in liquid form (and thus support life).
Origins of Cells (HL only) (A2.1)
Formation of Carbon Compounds (HL) (A2.1.1)
- A2.1.1 – Early Earth Conditions
- Early Earth conditions:
- Lack of free oxygen: no ozone.
- Higher concentrations of carbon dioxide and methane: higher temperatures and UV light penetration.
- Allowed carbon compounds to form spontaneously.
- Early Earth conditions:
Functions of Life (HL) (A2.1.2)
- A2.1.2 – Cells as Self-Sustaining Units
- Living organisms must carry out all the functions of life:
- Metabolism (chemical reactions resulting in energy conversion).
- Growth.
- Reproduction (passing hereditary molecules on to offspring).
- Response (to environmental stimuli).
- Homeostasis (maintaining a constant internal environment).
- Nutrition (breaking down compounds to obtain energy).
- Excretion (release of waste products).
- Cell theory: all organisms are composed of one or more cells; cells are the smallest unit of life; all cells come from pre-existing cells.
- Living organisms must carry out all the functions of life:
Evolution of the Cell (HL) (A2.1.3)
- A2.1.3 – Spontaneous Origin of Cells
- The first cells appeared in a pre-biotic environment (abiogenesis).
- Difficult to test: exact conditions of pre-biotic Earth cannot be replicated; protocells did not fossilize.
- Requirements for the evolution of the first cells:
- Catalysis (of simple organic molecules from inorganic molecules).
- Primordial soup hypothesis and the Miller-Urey experiment.
- Self-assembly (of simple organic molecules into more complex polymers).
- Compartmentalization (via membranes).
- Self-replication of molecules (enabling inheritance).
Catalysis – Origin of Carbon Compounds (HL) (A2.1.4)
- A2.1.4 – Evidence for Origin of Carbon Compounds
- Miller-Urey experiment demonstrated the non-living synthesis of organic materials (carbon compounds) from inorganic compounds.
- Produced:
- Hydrocarbons and amino acids.
- A reducing environment (oxidation prevented by the absence of oxygen).
- Favorable for development of carbon compounds.
Compartmentalization – Formation of Vesicles (HL) (A2.1.5)
- A2.1.5 – Spontaneous Formation of Vesicles
- Membrane-bound compartments are needed to allow the internal chemistry to become different from the outside.
- Fatty acids spontaneously organize into double-layered bubbles (vesicles).
- Provides a boundary between the internal and external environment (compartmentalization).
Self-Replication – RNA (HL) (A2.1.6)
- A2.1.6 – RNA as First Genetic Material
- RNA is thought to be:
- The first genetic material (because it can self-replicate).
- Can assemble spontaneously into nucleotides.
- The enzymes of the earliest cells (because it can act as a catalyst).
- RNA is thought to be:
LUCA Evidence (HL) (A2.1.7, A2.1.8, A2.1.9)
- A2.1.7 – Last Universal Common Ancestor
- Evidence of the last universal common ancestor (LUCA):
- Universal genetic code (using transcription and translation).
- Shared genes across organisms.
- Other lifeforms probably coexisted with LUCA but became extinct.
- Evidence of the last universal common ancestor (LUCA):
- A2.1.8 – Estimating Dates
- Approaches used to estimate dates of the first living cells and the last universal common ancestor:
- Biochemical evidence (stromatolites formed by microbes).
- Phylogenetic comparisons (comparing genomes).
- Molecular clock (using the mutation rate of DNA, RNA, or proteins to determine when divergence occurred).
- Approaches used to estimate dates of the first living cells and the last universal common ancestor:
- A2.1.9 – Hydrothermal Vents
- Evidence for evolution of the last universal common ancestor in the vicinity of hydrothermal vents:
- Fossil evidence of life from ancient seafloor hydrothermal vent precipitates.
- Conserved sequences from genomic analysis.
- Evidence for evolution of the last universal common ancestor in the vicinity of hydrothermal vents:
Cells (Unit 2)
Cell Structure (A2.2)
Organelles and Compartmentalization (B2.2)
Cell Specialization (B2.3)
Cells and Microscopes (A2.2.1, A2.2.2)
- A2.2.1 – Cells as Basic Unit
- Cells are the basic structural unit of all living organisms.
- A2.2.2 – Microscopy Skills
- Magnification = measured size of image / actual size of specimen.
- Example:
- Image length = 50 mm
- Actual length = 5 µm
- Magnification = \frac{50 \text{ mm}}{5 \mu \text{m}} = \frac{50,000 \mu \text{m}}{5 \mu \text{m}} = 10,000 \times
Advanced Microscopy (A2.2.3)
- A2.2.3 – Developments in Microscopy
- Electron microscopy:
- Scanning electron microscopes (SEM): surfaces.
- Transmission electron microscopes (TEM): inner structures.
- Freeze fracture (creates a plane through the sample).
- Cryogenic electron microscopy (proteins).
- Light microscopy:
- Fluorescent stains (cellular components).
- Immunofluorescence (using fluorescent antibodies to observe living tissue).
- Electron microscopy:
Cell Structures – All Cells (A2.2.4)
- A2.2.4 – Common Structures
- Structures common to cells in all living organisms:
- DNA (as genetic material).
- Cytoplasm (composed mainly of water).
- Plasma membrane (comprised of lipids).
- Structures common to cells in all living organisms:
Cell Structures – Prokaryotes (A2.2.5)
- A2.2.5 – Prokaryote Cell Structure
- Cell wall.
- Plasma membrane.
- Cytoplasm.
- Naked DNA in a loop.
- 70S ribosomes.
Cell Structures – Eukaryotes (A2.2.6)
- A2.2.6 – Eukaryote Cell Structure
- Plasma membrane (enclosing a compartmentalized cytoplasm with 80S ribosomes).
- Nucleus (with chromosomes made of DNA and histones, contained in a double membrane with pores).
- Membrane-bound cytoplasmic organelles:
- Mitochondria.
- Endoplasmic reticulum.
- Golgi apparatus.
- Vesicles/vacuoles (e.g., lysosomes).
- Cytoskeleton (made of microtubules and microfilaments).
Unicellular Organisms (A2.2.7)
- A2.2.7 – Processes of Life
- Homeostasis (using a cell membrane to control movement of materials in and out).
- Nutrition (using vacuoles to carry out digestion).
- Metabolism (using mitochondria or areas of enzymes).
- Excretion (using vacuoles to store waste).
- Movement (using cilia or flagella).
- Response to stimuli (using cilia or flagella to move).
- Growth (using ribosomes).
- Reproduction.
Differences in Eukaryotes (A2.2.8)
- A2.2.8 – Animal, Fungi, and Plant structures
- Cell Wall:
- Plant Cells: Cellulose
- Animal Cells: None
- Fungal Cells: Chitin
- Chloroplasts:
- Plant Cells: Yes
- Animal Cells: No
- Fungal Cells: No
- Vacuoles:
- Plant Cells: Large and Central; Carbohydrate Storage
- Animal Cells: Small and Numerous; Many functions
- Fungal Cells: Small and Numerous; Many functions
- Cilia or Flagella:
- Plant Cells: Rare
- Animal Cells: Sometimes
- Fungal Cells: Sometimes
- Centrosomes and/or Centrioles:
- Plant Cells: Centrosomes only
- Animal Cells: Both
- Fungal Cells: Centrosomes only
- Cell Wall:
Endosymbiosis (HL) (A2.2.12)
- A2.2.12 – Origin of Eukaryotic Cells
- All eukaryotes evolved from a common unicellular ancestor that had a nucleus and reproduced sexually.
- Mitochondria and chloroplasts evolved by endosymbiosis.
- Symbiotic relationship: larger cell provided protection and carbon compounds; smaller cell (eventually) provided ATP.
- Evidence: similarities with free-living bacteria (mitochondria and aerobic bacteria; chloroplasts and photosynthetic cyanobacteria).
- Both contain 70S ribosomes, naked circular DNA, ability to replicate (via binary fission).
Biochemistry (Unit 3)
Carbohydrates and Lipids (B1.1)
Proteins (B1.2)
Condensation Reactions (B1.1.2)
- B1.1.2 – Production of Macromolecules
- Monomers linked via covalent bonds to form polymers/macromolecules.
- One water molecule formed per reaction.
- Examples:
- Monosaccharides form polysaccharides (glucoses form starch).
- Amino acids form polypeptides.
- Nucleotides form nucleic acids.
Hydrolysis Reactions (B1.1.3)
- B1.1.3 – Digestion of Polymers
- Polymers broken down into monomers by hydrolyzing enzymes (digestion).
- Each reaction requires one water molecule as a reactant (split to provide the –H and –OH groups).
Monosaccharides (B1.1.4)
- B1.1.4 – Form and Function
- Ribose: pentose monosaccharide (5-carbon sugar).
- Glucose: hexose monosaccharide (6-carbon sugar).
- Molecular stability (due to having stable covalent bonds).
- High solubility (due to being polar).
- Easily transportable (due to solubility in water).
- Yields a great deal of energy (from oxidation reactions that break its covalent bonds).
Polysaccharides – Energy Storage (B1.1.5)
- B1.1.5 – Energy Storage Compounds
- Starch (amylose and amylopectin in plants) and glycogen (in animals) are compact due to coiling and branching during polymerization.
- Relatively insoluble (due to large molecular size).
- Relatively easy to:
- Add α-glucose monomers to build energy stores.
- Remove α-glucose monomers to mobilize energy stores.
Polysaccharides – Structural (B1.1.6)
- B1.1.6 – Structure of Cellulose
- Cellulose is formed in straight chains (due to alternating orientation of β-glucose monomers).
- Can be grouped in bundles and cross-linked with hydrogen bonds.
- Insoluble in water.
Lipids (B1.1.8)
- B1.1.8 – Hydrophobic Properties
- Lipids have non-polar covalent bonds between carbon and hydrogen.
- Hydrophobic.
- Dissolve in non-polar solvents (sparingly soluble in aqueous solutions).
- Fats, oils, waxes, and steroids.
Triglycerides and Phospholipids (B1.1.9)
- B1.1.9 – Formation
- One glycerol molecule can link:
- Three fatty acid molecules (forming a triglyceride + 3 water molecules).
- Two fatty acid molecules and one phosphate group (forming a phospholipid + 3 water molecules).
- One glycerol molecule can link:
Fatty Acids (B1.1.10)
- B1.1.10 – Types of Fatty Acids
- Saturated, Monounsaturated, Polyunsaturated
| Characteristic | Saturated | Monounsaturated | Polyunsaturated |
| :----------------------------- | :------------------------ | :------------------------ | :---------------------- |
| Bonds between carbons | Single bonds only | One double bond | More than one double bond |
| Melting point | Higher | Lower | Lower |
| State at room temperature | Solid (fat) | Liquid (oil) | Liquid (oil) |
| Used for energy storage in: | Animals (endotherms) | Plants and animals (endotherms) | Plants |
- Saturated, Monounsaturated, Polyunsaturated
Adipose Tissue (B1.1.11)
- B1.1.11 – Triglycerides in Adipose Tissue
- Adipose tissue stores fat (triglycerides).
- Hydrolyzed and used in cell respiration in the absence of carbohydrates.
- Long-term energy storage: insoluble in body fluid.
- Provide more energy than carbohydrates (per gram).
- Endotherms have a thick layer of adipose tissue (blubber) to provide thermal insulation.
Phospholipid Bilayers (B1.1.12)
- B1.1.12 – Formation of Bilayers
- Phospholipids are amphipathic molecules (hydrophilic and hydrophobic regions).
- Form a bilayer in aqueous solutions – the foundation of the plasma membrane.
Steroid Hormones (B1.1.13)
- B1.1.13 – Steroids Through Bilayers
- Steroids are hydrophobic hormones and can pass through the fatty acid layers of cell/nuclear membranes.
- Made from cholesterol.
- Examples: estradiol and testosterone.
Amino Acids - Structure
Amino Acids - Structures -B1.2.1
Generalized Structure of an Amino Acid
Consisting of:
- Amine Group (-NH_2)
- Carboxyl Group (-COOH)
- Variable Group (R-Group)
Amino Acids – Condensation Reactions (B1.2.2)
- B1.2.2 – Forming Dipeptides and Longer Chains
- Amino acid 1 + amino acid 2 → dipeptide + water.
Essential Amino Acids (B1.2.3)
- B1.2.3 – Dietary Requirements
- Essential amino acids (9 total) cannot be synthesized in human cells and must be obtained from food.
- Non-essential amino acids (11 total) can be synthesized in our cells from other amino acids.
Variety in Polypeptides (B1.2.4)
- B1.2.4 – Infinite Variety
- 20 different amino acids are coded for in the genetic code.
- Peptide chains can have any number of amino acids.
- Amino acids can be in any order.
- Examples: hemoglobin, keratin, lipase, collagen, histones, insulin.
pH and Temperature (B1.2.5)
- B1.2.5 – Effect on Protein Structure
- Protein function depends on having a precise three-dimensional shape.
- Denaturation: loss of shape (and therefore, function).
- Can be caused by:
- Temperatures higher than the optimum.
- Environmental pH that is not close to the optimum pH.
R-Groups (HL) (B1.2.6)
- B1.2.6 – Chemical Diversity
- R-groups determine the properties of assembled polypeptides.
- Hydrophobic
- Hydrophilic (polar, acidic, or basic).
- R-groups determine the properties of assembled polypeptides.
Primary Structure (HL) (B1.2.7)
- B1.2.7 – Impact on Conformation
- Primary structure: the number and sequence of amino acids held together by peptide bonds.
- Determines the three-dimensional shape of the protein.
- Proteins have precise, predictable, and repeatable structures.
Secondary Structure (HL) (B1.2.8)
- B1.2.8 – Pleating and Coiling
- Secondary structure: if primary structure contains only non-polar R-groups, they will form an alpha helix or a beta-pleated sheet.
- Held together/stabilized by hydrogen bonds.
Tertiary Structure (HL) (B1.2.9)
- B1.2.9 – Dependence on Bonds and Interactions
- Tertiary structure: overall three-dimensional structure of a protein.
- Pairs of cysteines form very strong disulfide bonds.
- Amine and carboxyl groups in R-groups can become:
- Positively charged (by binding of hydrogen ions).
- Negatively charged (by dissociation of hydrogen ions).
- Two oppositely-charged R-groups form ionic bonds.
- Non-polar amino acids form hydrophobic interactions (interior regions).
- Polar amino acids form hydrogen bonds (exterior regions).
Proteins – Tertiary Structure (HL) (B1.2.10)
- B1.2.10 – Effect of Polar and Non-Polar Amino Acids
- Water-soluble proteins: hydrophobic amino acids clustered in the core of globular proteins.
- Example: hydrophobic regions help integral proteins embed in membranes.
Quaternary Structure (HL) (B1.2.11)
- B1.2.11 – Non-Conjugated and Conjugated Proteins
- Quaternary structure: two or more polypeptide chains bonded together to make a single molecule.
- Non-conjugated: only protein groups (e.g., insulin).
- Conjugated: includes one or more non-protein groups (e.g., hemoglobin).
Form and Function (HL) (B1.2.12)
- B1.2.12 – Globular and Fibrous Proteins
- Fibrous proteins have a regular and geometric shape.
- Structural uniformity makes it good for building (e.g., collagen).
- Globular proteins have a wide variety of amino acids.
- Allows for specialization to a specific purpose (e.g., insulin).
- Fibrous proteins have a regular and geometric shape.
Enzymes (Unit 4)
Enzymes and Metabolism (C1.1)
Enzymes and Metabolism (C1.1.1, C1.1.2)
- C1.1.1 – Enzymes as Catalysts
- Enzymes: organic catalysts that increase the rates of reaction in cells.
- C1.1.2 – Role of Enzymes
- Metabolism: all the chemical reactions that occur in an organism.
- Each reaction controlled by a specific enzyme (enzymes control metabolism).
- Metabolism: all the chemical reactions that occur in an organism.
Metabolism (C1.1.3)
- C1.1.3 – Anabolic and Catabolic Reactions
| Anabolic Reactions | Catabolic Reactions | ||
|---|---|---|---|
| Description | Build macromolecules | Break down macromolecules | |
| Process | Condensation reactions | Hydrolysis reactions | |
| Energy | Require energy | Release energy | |
| Examples | Protein synthesis, glycogen formation, photosynthesis | Digestion and cell respiration | |
Enzyme Structure (C1.1.4) |
- C1.1.4 – Globular Proteins with Active Site
- Enzymes are globular proteins.
- Enzymes have an active site with a shape complementary to their substrate.
- Active sites are composed of only a few amino acids.
- Other amino acids interact to give the active site its properties for catalysis.
- Shape changes cause denaturation.
Induced-Fit Binding (C1.1.5)
- C1.1.5 – Substrate and Active Site Interactions
- Induced-fit model: both substrate and enzyme change shape when binding occurs.
- Shape changes of the substrate put stress on its bonds, causing it to become destabilized (more likely to react).
- Induced-fit model: both substrate and enzyme change shape when binding occurs.
Molecular Motion (C1.1.6)
- C1.1.6 – Motion and Collisions
- Movement is needed for a substrate molecule and an active site to come together.
- Large substrate molecules and enzymes can be immobilized by being embedded in membranes (to increase the efficiency of collisions).
Enzyme Action (C1.1.7)
- C1.1.7 – Structure, Specificity, and Denaturation
- Active site must be a specific shape to allow formation of the enzyme-substrate complex.
- Denaturation changes the shape of the active site:
- Substrate can’t bind.
- Reaction can’t occur.
Factors Affecting Enzyme Activity (C1.1.8)
- C1.1.8 – Temperature, pH, and Substrate Concentration
- Collision theory: reactants must collide with sufficient energy and correct orientation.
- Temperature: molecules move faster in higher temperatures, allowing more collisions.
- High temperatures can denature an enzyme.
- pH: changes in pH can denature an enzyme.
- Substrate concentration: more substrate allows more collisions.
- Reaction rate plateaus at enzyme saturation.
- Temperature: molecules move faster in higher temperatures, allowing more collisions.
- Collision theory: reactants must collide with sufficient energy and correct orientation.
Measuring Reaction Rates (C1.1.9)
- C1.1.9 – Measurements in Enzyme-Catalyzed Reactions
- The rate of an enzyme-controlled reaction can be measured using:
- Rate at which substrate is used.
- Rate at which the product is produced.
- The rate of an enzyme-controlled reaction can be measured using:
Activation Energy (C1.1.10)
- C1.1.10 – Effect of Enzymes
- Energy required to break bonds within the substrate.
- Activation energy: amount of energy required for a reaction to occur.
- Enzymes lower the activation energy of the reaction.
- Energy is released when bonds are made to form the product.
- Energy required to break bonds within the substrate.
Intracellular vs. Extracellular Reactions (HL) (C1.1.11)
- C1.1.11 – Reactions Location
- Intracellular reactions occur within a cell.
- Examples: glycolysis and the Krebs cycle.
- Extracellular reactions occur outside a cell.
- Example: chemical digestion in the gut.
- Intracellular reactions occur within a cell.
Metabolic Efficiency (HL) (C1.1.12)
- C1.1.12 – Heat Energy
- Metabolic reactions are not 100% efficient in energy transfer.
- Heat generation is inevitable.
- Endotherms depend on this heat production for maintenance of constant body temperature.
- Metabolic reactions are not 100% efficient in energy transfer.
Metabolic Pathways (HL) (C1.1.13)
- C1.1.13 – Cyclical and Linear Pathways
- Metabolic pathways (specific sequences of reactions) can be:
- Linear (as in glycolysis).
- Cyclical (as in the Krebs cycle and Calvin cycle).
- Metabolic pathways (specific sequences of reactions) can be:
Non-competitive Inhibition (HL) (C1.1.14)
- C1.1.14 – Allosteric Sites
- Non-competitive inhibition (allosteric inhibition):
- Specific substances (inhibitors) can bind to an allosteric site and cause a conformational change of the enzyme.
- Active site changes shape, preventing the substrate from binding (preventing the reaction).
- Binding is reversible and the enzyme can return to its normal shape.
- Not affected by substrate concentration.
- Non-competitive inhibition (allosteric inhibition):
Competitive Inhibition (HL) (C1.1.15)
- C1.1.15 – Reversible Binding
- Competitive inhibition: a competitive inhibitor competes with the substrate for the active site.
- Overcome by increasing the substrate concentration.
- Example: statins bind with the active site of an enzyme involved in the synthesis of cholesterol, reducing cholesterol production.
- Competitive inhibition: a competitive inhibitor competes with the substrate for the active site.
Feedback Inhibition (HL) (C1.1.16)
- C1.1.16 – Regulation
- Feedback inhibition (or end product inhibition) prevents unnecessary reactions from occurring.
- High concentrations of the end product result in inhibition of the first reaction in the pathway via non-competitive inhibition.
- Example: isoleucine binds with the allosteric site of the first enzyme used in its production pathway, preventing the binding of the initial substrate (threonine).
- Feedback inhibition (or end product inhibition) prevents unnecessary reactions from occurring.
Mechanism-Based Inhibition (HL) (C1.1.17)
- C1.1.17 – Irreversible Inhibitor
- Transpeptidase catalyzes the last step in the formation of bacterial cell walls.
- Mechanism-based inhibition: penicillin irreversibly binds to the active site of transpeptidase.
- Bacterial resistance to penicillin occurs through:
- Changing the shape of penicillin by penicillinase.
- Mutations changing the shape of the active site of transpeptidase.
- Transpeptidase catalyzes the last step in the formation of bacterial cell walls.
Energetics (Unit 5)
ATP – Structure and Function (C1.2.1)
- C1.2.1 – Energy Distribution
- Adenosine triphosphate (ATP) is a nucleotide that functions as the energy currency of the cell.
- The last two phosphate groups are attached to the main molecule by high-energy bonds (unstable covalent bonds with low activation energy that are easily broken by hydrolysis).
- Hydrolysis of ATP releases free energy to perform cellular work.
- Adenosine triphosphate (ATP) is a nucleotide that functions as the energy currency of the cell.
ATP – Life Processes (C1.2.2)
- C1.2.2 – Activities using ATP
- Active transport.
- Synthesis of macromolecules (anabolism).
- Movement of the whole cell (e.g., via flagella).
- Movement of cell components (e.g., chromosomes).
ATP and ADP (C1.2.3)
- C1.2.3 – Energy Transfer
- Hydrolysis of ATP to ADP + P: energy is released (exergonic).
- Synthesis of ATP from ADP + P: energy is required (endergonic).
- Energy is stored in the high-energy bond between the last two phosphate groups.
Respiration (C1.2.5)
- C1.2.5 – Anaerobic and Aerobic
- Respiration: the synthesis of ATP using the energy released from the breakdown of carbon compounds.
- Types of respiration:
- Aerobic cell respiration (using an ETC with oxygen).
- Anaerobic cell respiration (using an ETC without oxygen).
- Fermentation (without using an ETC):
- alcoholic fermentation
- lactic acid fermentation.
Respiration in Humans (C1.2.5)
Differences in types of Human Respiration.
| Differences (in Humans) | Fermentation (a type of anaerobic respiration) | Aerobic Cell Respiration (a type of aerobic respiration) |
|---|---|---|
| Oxygen | Without oxygen | With oxygen |
| Location | Cytoplasm only | Cytoplasm and mitochondria |
| Substrates | Carbohydrates (monosaccharides) only | Carbohydrates (monosaccharides), lipids (glycerol and fatty acids), proteins (amino acids) |
| ATP yield | Low | High |
| Waste product(s) | Lactate/lactic acid | Carbon dioxide and water |
Cell Respiration (C1.2.4)
- C1.2.4 – ATP Production
- Cell respiration: a type of respiration that uses an ETC.
- Can be aerobic or anaerobic.
- Principal substrates: glucose and fatty acids (other carbon compounds can be used).
- Cell respiration: a type of respiration that uses an ETC.
Cell Respiration – Rates (C1.2.6)
- C1.2.6 – Variables Affecting Rate
- Factors affecting the rate of cell respiration:
- Temperature (optimum of 20-30°C; decreasing as it deviates).
- Carbon dioxide concentration (inversely related).
- Oxygen concentration (directly related in aerobic cell respiration; none used in anaerobic cell respiration).
- Glucose concentration (directly related).
- Type of cell (dependent on energy requirements).
- Factors affecting the rate of cell respiration:
Cell Respiration – Rates (C1.2.6)
- Respirometers can be used to calculate the rate of cell respiration by measuring the oxygen rate of exchange
Aerobic cell respiration
Anaerobic cell respiration
NAD+ (HL) (C1.2.7)
- C1.2.7 – Hydrogen Carrier
- Oxidation: losing electrons/hydrogen; gaining oxygen.
- Results in a compound with lower potential energy.
- Reduction: gaining electrons/hydrogen; losing oxygen.
- Results in a compound with higher potential energy.
- Nicotinamide adenine dinucleotide (NAD+): a coenzyme that carries out oxidation and reduction in cell respiration.
- Acts as a hydrogen carrier:
- NAD+ + hydrogen = NADH (i.e., reduced NAD).
- NADH – hydrogen = oxidized/dehydrogenated NAD+.
- Acts as a hydrogen carrier:
- Oxidation: losing electrons/hydrogen; gaining oxygen.
Glycolysis (HL) (C1.2.8)
- C1.2.8 – Glucose to Pyruvate
- Glycolysis: the initial breakdown of glucose.
- Phosphorylation: Two phosphates (from two ATP) are added to glucose
- Lysis: Split into 2 3C molecules (TP/G3P)
- Oxidation: Each is oxidized to tow NADH are formed - Another phosphate is added to each
- ATP formation: The two phosphates are removed from each (added to ADP -> 4 ATP) - tow Pyruvate molecules are formed.
- Glycolysis: the initial breakdown of glucose.
Fermentation (HL) (C1.2.9)
- C1.2.9 – Pyruvate to Lactate
- If no oxygen is present, anaerobic respiration (fermentation) will occur.
- Animals: pyruvate + NADH = lactate + NAD+.
- Plants/yeast: pyruvate + NADH = ethanol + carbon dioxide + NAD+.
- Regeneration of NAD+ allows glycolysis (and the production of
- If no oxygen is present, anaerobic respiration (fermentation) will occur.