Biocatalysis & Bioremediation Notes

Bioremediation: Introduction

  • Bioremediation is the use of biological agents to remove or neutralize pollutants from contaminated soil, water, and air.
  • Contamination overview, types of contaminants, technologies, and the definition, advantages, and disadvantages of bioremediation will be explored.

Contamination Overview

Air Pollution

  • Air pollution is the contamination of indoor or outdoor environments by chemical, physical, or biological agents, modifying the atmosphere's natural characteristics.
  • The World Health Organization (WHO) reports that indoor and outdoor air pollution causes approximately seven million deaths globally each year.
  • 99% of the global population breathes air exceeding WHO guideline limits, containing high levels of pollutants.
  • Smog: A mixture of smoke and fog.
  • Soot: Fine black particles from incomplete combustion.
Temperature Inversions
  • Normal conditions: Warm air rises, dispersing polluted air through convection.
  • Temperature inversions: Trap polluted air, increasing ground-level exposure.
Sources of Air Pollution
  • Mobile sources: Cars, buses, planes, trucks, and trains.
  • Stationary sources: Power plants, oil refineries, industrial facilities, and factories.
  • Area sources: Agricultural areas, cities, and wood-burning fireplaces.
  • Natural sources: Wind-blown dust, wildfires, and volcanoes.
Major Air Pollutants
  • PM: Small liquid or solid particles suspended in the air.
  • O3: Formed from volatile organic compounds (VOCs) and nitrogen oxides (NOx) in sunlight, a major component of smog.
  • NO2: Produced by combustion, contributes to acid rain.
  • SO2: Released from burning coal and oil, contributes to acid rain.
  • CO: Colorless, odorless gas from incomplete combustion.
  • VOCs: Organic compounds with high vapor pressure and low water solubility, such as aromatic hydrocarbons (benzene, toluene, xylene, ethyl benzene) and halogenated hydrocarbons (chloroethylene and trichloroethylene).

Water Pollution

  • Water pollution is the contamination of water bodies (lakes, rivers, oceans, and groundwater) from industrial waste, agricultural runoff, sewage discharge, and plastic waste.
Global Water Distribution
  • Oceans (Saltwater): 97.5%
  • Freshwater: 2.5%
    • Ice caps and glaciers: 79%
    • Groundwater: 20%
    • Other freshwater sources: 1% (lakes, soil, atmosphere, rivers, living organisms)
Global Freshwater Use
  • Global freshwater withdrawals for agriculture, industry, and domestic uses since 1900 have increased significantly.
  • Projected global water scarcity indicates the world is set to face a 40% water shortage by 2030.
Water Scarcity Indicators
  • WS: Water scarcity based on quantity only.
  • WSq: Water scarcity including both water quantity and water quality.
  • WSqdesal+wwr: Water scarcity based on both water quantity and quality, including desalination and treated wastewater reuse.
Sources of Water Pollution
  • Human wastes: Sewage in cities and rural areas.
  • Industrial wastes: Chemicals, smoke, exhaust, heat pollution.
  • Chemical run-off: Pesticides and fertilizers from farms, gas, oil, and salt from roads.
  • Point sources: Discharged to the environment through pipes, sewers, ditches, etc.
  • Non-point sources: Discharged over large areas (e.g., farms, lawns).
Potential Sources of Water Contamination
  • Pesticides, fertilizers, air pollution (smog, smoke, acid rain), chlorine, fluoride, industry, landfills, nitrates, chemical spills, PCBs/Benzene, toxic waste, leaking gas tanks, municipal treatment, copper & lead pipes, septic systems.
  • Other sources include atmospheric deposition, commercial and animal fertilizer, fodder, mariculture, sludge, surface run-off, sewage treatment facilities, underground aquifers, plants, algae, drains, groundwater, combustion, landfill, urban run-off, septic tanks, industrial sites, residential areas, and underground storage tanks.
Microbial Contamination
  • Unintentional or accidental introduction of potentially harmful microorganisms such as bacteria, viruses, and fungi.
  • COVID-19 in wastewater: SARS-CoV-2 excretion into wastewater allows for wastewater surveillance as an early warning system for community spread.

Soil Pollution

Causes of Soil Pollution
  • Agriculture (excessive use of fertilizers and pesticides).
  • Industrial processes.
  • Deforestation.
  • Spills and leaks.
  • Littering.
  • Waste disposal, including chemical and nuclear waste.
  • Mining.
  • Construction.
  • Transportation.
  • Landfills.
  • Acid rain.
  • Illegal dumping.
Effects of Soil Pollution
  • Health effects.
  • Effects on microorganisms and animals.
  • Effects on fertility and growth behavior of plants.
  • Reduction in crop yields.
  • Effects on aquatic life and soil structure.
  • Contamination of groundwater. Increase in algae.
  • Changes in pH-levels.
  • Dust and air pollution.
Solutions for Soil Pollution
  • Government regulations.
  • Reforestation.
  • Reduction in consumption.
  • Recycling.
  • Bioremediation.
  • Reduction in the use of fertilizers and pesticides.
  • Switch from conventional to organic products.
  • Avoid littering and the use of fossil fuels.
  • Organic gardening.
  • Proper waste disposal.
  • Wetland restoration.
Soil Contaminants
  • Contaminants affecting the solid matrix (soil, sludge, sediment):
    • Heavy metals (10.2%)
    • Mineral oil (9.3%)
    • Polycyclic aromatic hydrocarbons (10.9%)
    • Aromatic hydrocarbons (8.3%)
    • Chlorinated hydrocarbons (23.8%)
    • Others (34.8%)
    • Phenols
    • Cyanides
  • Contaminants affecting the fluid matrix (groundwater, surface water, leachate):
    • Heavy metals (10%)
    • Mineral oil (6.4%)
    • Aromatic hydrocarbons (30.9%)
    • Chlorinated hydrocarbons (13.6%)
    • Polycyclic aromatic hydrocarbons (14.9%)
    • Others (22%)
    • Phenols
    • Cyanides

Oil Spills

  • The global number of oil spills from tankers has generally decreased from 1970 to 2021.
  • The global quantity of oil spilled from tankers has also decreased between 1970 and 2021.
Exxon Valdez Oil Spill
  • On March 24, 1989, the Exxon Valdez oil tanker struck Bligh Reef in Alaska’s Prince William Sound region.
  • Approximately 40878m340878 m^3 of oil were released, affecting over 2092km2092 km of shoreline.
  • Estimated deaths:
    • 250,000 seabirds
    • 2,800 sea otters
    • 300 harbor seals
    • 250 bald eagles
    • 22 killer whales
    • Billions of salmon and herring eggs
  • Cleanup efforts included skimming oil, applying dispersants, washing beaches with hot water, and rescuing animals.
  • Oil can penetrate deeply into beach sediments, making surface visibility an unreliable indicator of total contamination.
Prudhoe Bay Oil Spills
  • Trans-Alaska Pipeline System: An 800-mile-long pipeline from Prudhoe Bay to Valdez.
  • Crosses over 800 rivers and streams, three mountain ranges, and three major active faults.
  • Three-quarters traverses fragile permafrost.
  • Built in a zigzag fashion to accommodate temperature changes and potential earthquakes.
  • Approximately 500 oil spills occur each year in the Prudhoe Bay oil fields and along the 1280km1280 km pipeline.
  • In March 2006, a corroded pipeline leaked up to 1010m31010 m^3 of oil over five days.
  • Shut down a plant processing 100,000 barrels of oil per day (over 10% of the pipeline's daily flow).
  • Cleanup crews recovered more than 72m372 m^3 of leaked crude oil.