final practice tests
Exam 1
Intro
Course Overview
Course: Spring 2025 BIO 403 Physiology I
Instructor: Katerina Tsouma, Ph.D.
Department: Biology, University of Dayton
Introduction to Physiology
Etymology:
Aristotle (384-322 BCE) - Physis (nature) + Logos (to talk or learn)
Hippocrates (ca. 460-377 BCE) - contributions to early physiology.
Advances in Physiology
Concept of Physiology:
Integration of various biological systems
Emergent properties in physiology.
Branches of Biological Study Related to Physiology:
Anatomy
Ecology
Cell Biology
Molecular Biology
Chemistry
Biology
Organ Systems
Body Systems (10 total):
Integumentary - Offers a protective barrier.
Musculoskeletal - Provides movement and support.
Respiratory - Facilitates gas exchange (O2 and CO2).
Digestive - Engages in nutrient intake and waste elimination.
Urinary - Manages excessive water and waste removal.
Reproductive - Responsible for egg and sperm production.
Circulatory - Transports materials between cells.
Nervous - Coordinates body function.
Endocrine - Regulates physiological responses through hormones.
Immune - Protects against pathogens.
Key Concepts in Physiology
Homeostasis:
Definition: The relative constancy of the internal environment.
Key Contributors: Walter Cannon (1929) coined the term; Claude Bernard discussed stability in physiological functions.
Homeostasis consists of balance among various physiological functions.
Pathophysiology: The study of physiological failure resulting in disease.
Importance of Studying Physiology
Serves as the basis for several medical disciplines, including:
Pathophysiology
Pharmacology
Immunology
Therapeutics
Essential for basic biomedical research.
Course Structure Details
Course encompasses physical-chemical examination of physiological events related to:
Cells
Excretion
Nerves
Muscles
Blood
Heart
Circulation
Respiration
Study Guidance
Physio-Arts Projects: Include creative study notes on various physiological systems such as (but not limited to):
Endocrine System
Neurophysiology
Cardiovascular Physiology
Renal Physiology
Aim for thoroughness and creativity in study notes.
Historical Overview of the Nervous System
Ancient Developments
Neolithic Age: Evidence of cerebral spinal fluid and surgical practices.
Ancient Egypt: The first insights into brain function.
Ancient Greece: Concepts of neurons and humors.
Neuroanatomy and Signal Transmission
Neuron Structure:
Neurons and glial cells.
Neurons consist of dendrites (receive signals), axon (transmit signals), and synapse (communication junction).
Types of Neurons:
Sensory Neurons: Carry information from sensory organs.
Motor Neurons: Transmit signals to muscles.
Interneurons: Facilitate communication within the CNS.
Homeostasis and Feedback Mechanisms
Importance of maintaining internal equilibrium through compensatory mechanisms.
Physicians diagnose and manage conditions based on disruptions in homeostasis.
Membrane Dynamics and Signaling
Cell Signaling Mechanisms:
Local Communication:
Gap junctions
Contact-dependent signals
Autocrine/paracrine signals
Long-distance Communication:
Endocrine system (hormones)
Nervous system (neurotransmitters)
Renal Physiology
Kidney Functions:
Secretion, filtration, and reabsorption.
Understanding GFR (Glomerular Filtration Rate) and its regulation.
Ch 3
1. BODY COMPARTMENTATION
A. Major Body Cavities
Cranial Cavity
Houses and protects the brain
Separated from other cavities by bone
Thoracic Cavity
Contains vital organs: heart, lungs
Protected by ribcage
Separated from abdomen by diaphragm
Abdominopelvic Cavity
Contains digestive organs: stomach, intestines, liver
Houses accessory organs: pancreas, gallbladder, spleen
Contains urinary system: bladder
Houses reproductive organs
Largest body cavity
B. Fluid-Filled Compartments
Circulatory System
Blood vessels
Heart chambers
Contains blood plasma and cells
Special Sense Organs
Eyes (aqueous and vitreous humor)
Inner ear (endolymph and perilymph)
Central Nervous System
Cerebrospinal fluid (CSF)
Surrounds and protects brain and spinal cord
Provides nutrients and removes waste
Serous Cavities
Pleural sacs (around lungs)
Pericardial sac (around heart)
Contain small amount of lubricating fluid
C. Body Fluid Compartments
Intracellular Fluid (ICF)
Located within cells
Comprises about 2/3 of total body water
Contains high K⁺, low Na⁺
Extracellular Fluid (ECF)
Located outside cells
Divided into:
Blood Plasma
Fluid portion of blood
Contains proteins, nutrients, wastes
Interstitial Fluid
Surrounds most cells
Mediates exchange between blood and cells
Similar to plasma but lower protein content
2. CELL MEMBRANE (PLASMALEMMA)
A. Primary Functions
Barrier Function
Controls what enters and exits cell
Maintains cellular integrity
Separates internal from external environment
Exchange Regulation
Selective permeability
Controls movement of substances
Maintains concentration gradients
Communication
Contains receptors for signals
Facilitates cell signaling
Enables response to environment
Structural Support
Anchors cytoskeleton
Forms cellular junctions
Maintains cell shape
B. Membrane Structure (Fluid Mosaic Model)
Phospholipid Bilayer
Amphipathic molecules
Hydrophilic heads face aqueous environments
Hydrophobic tails face interior
Provides basic barrier function
Membrane Proteins
Integral (transmembrane) proteins
Cross membrane 1-12 times
Transport proteins
Receptors
Cell adhesion molecules
Peripheral proteins
Attached to membrane surface
Regulatory and structural roles
Lipid Rafts
Specialized membrane domains
Rich in cholesterol and sphingolipids
Important for:
Signal transduction
Membrane trafficking
Protein organization
Carbohydrates
Attached to proteins (glycoproteins)
Attached to lipids (glycolipids)
Form glycocalyx
Role in cell recognition
3. CELLULAR ORGANIZATION
A. Major Cell Components
Nucleus
Contains genetic material
Control center of cell
Surrounded by nuclear envelope
Contains nucleoli
Cytoplasm
Cytosol
Liquid portion
Site of many metabolic reactions
Contains dissolved molecules and ions
Organelles
Cytoskeleton
Cell Membrane
Discussed above
B. Membranous Organelles
Mitochondria
Energy production
Double membrane structure
Contains own DNA
Can replicate independently
Endoplasmic Reticulum (ER) Rough ER:
Studded with ribosomes
Protein synthesis and modification
Connected to nuclear envelope
Smooth ER:
No ribosomes
Lipid synthesis
Steroid hormone production
Calcium storage
Drug detoxification
Golgi Apparatus
Protein modification
Sorting center
Packaging of secretory products
Formation of lysosomes
Lysosomes
Contain digestive enzymes
Break down cellular waste
Cellular recycling
Autophagy
Peroxisomes
Oxidative reactions
Breakdown of fatty acids
Detoxification
H₂O₂ metabolism
C. Non-membranous Organelles
Ribosomes
Protein synthesis
Can be free or attached to ER
Made of RNA and protein
Storage Inclusions
Lipid droplets
Glycogen granules
Temporary storage structures
D. Cytoskeleton
Components
Microfilaments (actin filaments)
Intermediate filaments
Microtubules
Functions
Cell shape maintenance
Cell movement
Organelle movement
Cell division
Muscle contraction
Motor Proteins
Myosins
Muscle contraction
Intracellular transport
Kinesins
Anterograde transport
Vesicle movement
Dyneins
Retrograde transport
Ciliary/flagellar movement
4. CELLULAR CONNECTIONS
A. Extracellular Matrix (ECM)
Functions
Provides structural support
Enables cell adhesion
Facilitates cell communication
Regulates cell behavior
Holds tissue together
Components
Proteins (collagen, elastin)
Proteoglycans
Glycoproteins
Ground substance
B. Intercellular Junctions
Gap Junctions
Structure:
Connexin proteins form channels
Create direct cytoplasmic connections
Form hexagonal arrays
Functions:
Allow direct cell-cell communication
Permit passage of small molecules
Enable electrical coupling
Regulated opening/closing
Tight Junctions
Structure:
Made of claudins and occludins
Create tight seals between cells
Form continuous bands
Functions:
Create selective barriers
Prevent paracellular transport
Maintain polarity
Dynamic barrier properties
Anchoring Junctions
Types:
Desmosomes (cell-cell)
Hemidesmosomes (cell-ECM)
Adherens junctions
Components:
Cadherins (cell-cell adhesion)
Integrins (cell-ECM adhesion)
Functions:
Mechanical strength
Tissue integrity
Stress resistance
5. TISSUE TYPES
A. Epithelial Tissue
General Characteristics
Covers surfaces
Lines cavities
Forms glands
Has polarity (apical/basal)
Rests on basement membrane
Avascular
Structural Classifications
By layers:
Simple (one layer)
Stratified (multiple layers)
By cell shape:
Squamous (flat)
Cuboidal (cube-shaped)
Columnar (tall)
Functional Categories a. Exchange Epithelia
Simple squamous type
Found in:
Lung alveoli
Blood vessels (endothelium)
Allows gas/nutrient exchange
b. Transporting Epithelia
Usually simple cuboidal/columnar
Characteristics:
Many mitochondria
Membrane specializations
Tight junctions
Found in:
Kidney tubules
Intestinal lining
c. Ciliated Epithelia
Has moving cilia
Functions:
Moves fluids/particles
Clears airways
Located in:
Respiratory tract
Parts of reproductive tract
d. Protective Epithelia
Usually stratified squamous
Prevents:
Mechanical damage
Chemical damage
Dehydration
Found in:
Skin
Mouth
Esophagus
e. Secretory Epithelia
Types:
Exocrine glands
Release products through ducts
Examples: sweat, salivary glands
Endocrine glands
Release hormones into blood
Examples: thyroid, pancreatic islets
B. Connective Tissue
General Characteristics
Extensive ECM
Scattered cells
Various fiber types
Supporting function
Types and Specific Features
a. Loose Connective Tissue
Flexible
Well-vascularized
Found under skin, around organs
Contains various cells:
Fibroblasts
Macrophages
Mast cells
b. Dense Connective Tissue
Regular
Parallel collagen fibers
Found in tendons, ligaments
Irregular
Random fiber arrangement
Found in dermis, organ capsules
c. Bone
Calcified matrix
Cells:
Osteoblasts (form bone)
Osteocytes (maintain bone)
Osteoclasts (resorb bone)
Provides:
Structural support
Mineral storage
Blood cell formation
d. Cartilage
Types:
Hyaline
Elastic
Fibrocartilage
Avascular
Found in:
Joints
Nose
Ears
Trachea
e. Blood
Liquid connective tissue
Components:
Plasma
Red blood cells
White blood cells
Platelets
f. Adipose Tissue
Types:
White fat (energy storage)
Brown fat (heat production)
Functions:
Energy storage
Insulation
Cushioning
Endocrine function
CH 5
1. BODY FLUID COMPARTMENTS AND OSMOTIC CONCEPTS
A. Body Fluid Distribution
Major Compartments:
Intracellular Fluid (ICF) - within cells
Extracellular Fluid (ECF)
Blood Plasma
Interstitial Fluid (surrounds cells)
Factors Affecting Body Water Content:
Age
Sex
Body composition
B. Concentration Concepts
Concentration & Molarity
Concentration (% w/v): grams per 100mL
Molarity (M): moles per liter
Formula: C = moles/L
Conversion: moles = mass/molecular weight
Osmolarity
Definition: Number of osmotically active particles per liter
Units: Osmoles/L (OsM) or milliosmoles/L (mOsM)
Normal body osmolarity: ~300 mOsM
Calculation: OSMOLARITY = MOLARITY × number of particles per molecule
Types of Solutes:
Dissociating compounds (e.g., NaCl → Na⁺ + Cl⁻)
Non-dissociating molecules (e.g., glucose)
C. Osmotic Relationships
Comparative Terms:
Isosmotic: Same particle concentration
Hyperosmotic: Higher particle concentration
Hyposmotic: Lower particle concentration
Tonicity
Definition: Solution's ability to affect cell volume
Based on non-penetrating solutes only
Categories:
Isotonic: No volume change
Hypertonic: Cell shrinks
Hypotonic: Cell swells
Solute Categories:
Penetrating: Can cross membrane
Non-penetrating: Cannot cross membrane
2. MEMBRANE TRANSPORT PROCESSES
A. Basic Transport Types
Bulk Flow
Movement of fluids due to pressure gradients
Applies to gases and liquids
Membrane-Specific Transport
Passive vs. Active transport
Dependent on membrane permeability
B. Diffusion
Characteristics:
Passive process (no energy required)
Moves down concentration gradient
Reaches equilibrium
Temperature dependent
Size dependent (smaller molecules faster)
Simple Diffusion
Direct membrane crossing
For lipophilic molecules
Rate depends on:
Membrane permeability
Surface area
Concentration gradient
C. Protein-Mediated Transport
Channel Proteins
Form water-filled pores
Types:
Open channels
Gated channels (chemical, voltage, mechanical)
Examples:
Aquaporins
Ion channels
Carrier Proteins
Types:
Uniport: Single molecule transport
Symport: Two molecules same direction
Antiport: Two molecules opposite directions
More complex than channels
Usually slower than channels
D. Active Transport
Primary Active Transport
Uses ATP directly
Examples:
Na⁺/K⁺ ATPase
H⁺/K⁺ ATPase
Ca²⁺ ATPase
Secondary Active Transport
Uses existing gradients
Examples:
SGLT (Na⁺-glucose transporter)
E. Vesicular Transport
Endocytosis
Types:
Phagocytosis (large particles)
Pinocytosis (fluid uptake)
Receptor-mediated endocytosis
Requires ATP
Uses clathrin or caveolin coating
Exocytosis
Requires Rab proteins and SNAREs
Ca²⁺ dependent
ATP dependent
3. MEMBRANE POTENTIAL AND ELECTRICAL PROPERTIES
A. Electrical Disequilibrium
Basic Principles
Body maintains electrical neutrality overall
Chemical disequilibrium between ICF and ECF
ICF: net negative charge
ECF: net positive charge
Electrical Basics
Conservation of electrical charge
Opposite charges attract
Like charges repel
Energy required to separate charges
Conductors vs. Insulators
B. Membrane Potential Basics
Definition
Electrical difference across membrane
Result of uneven charge distribution
Measured in millivolts (mV)
Ionic Equilibrium Potentials
Each ion has its own equilibrium potential
Values at 37°C:
K⁺: -90 mV
Na⁺: +60 mV
Ca²⁺: +122 mV
Cl⁻: -63 mV
Nernst Equation
Calculates ionic equilibrium potential
Formula: Eion = 61mV × log([ion]o/[ion]i)/z
Where:
Eion = Ionic equilibrium potential
z = ion charge
[ion]o = outside concentration
[ion]i = inside concentration
C. Resting Membrane Potential
Characteristics
Steady state electrical difference
Typically around -70 mV
Inside negative relative to outside
Represents stored potential energy
Ionic Basis
Maintained by:
Uneven ion distribution
Selective membrane permeability
Na⁺/K⁺ pump activity
Na⁺/K⁺ Pump Function
Pumps 3 Na⁺ out for every 2 K⁺ in
Creates and maintains gradients
Electrogenic (creates charge difference)
ATP dependent
D. Changes in Membrane Potential
Depolarization
Causes:
Na⁺ entry
Ca²⁺ entry
Makes membrane potential more positive
Hyperpolarization
Causes:
K⁺ exit
Cl⁻ entry
Makes membrane potential more negative
Key Points
Changes due to ion permeability alterations
Concentration gradients remain relatively stable
Requires energy to maintain
E. Transport in Epithelial Cells
Transporting Epithelia
Polarized structure
Apical membrane
Basolateral membrane
Directional transport
Transport Pathways
Transcellular (through cells)
Crosses both apical and basolateral membranes
Requires specific transporters
Paracellular (between cells)
Through tight junctions
Passive process
Examples
Absorption (lumen to ECF)
Intestinal epithelium
Glucose absorption
Secretion (ECF to lumen)
Salivary glands
Sweat glands
Glucose Transport Example
Apical membrane: SGLT (Na⁺-glucose cotransport)
Basolateral membrane: GLUT (facilitated diffusion)
Na⁺/K⁺ ATPase maintains Na⁺ gradient
Net movement from lumen to blood
Ch 6
Communication, Integration, and Homeostasis - BIO 403 Physiology I
Physiological Signals
Electrical Signals: Changes in membrane potential within cells.
Chemical Signals: Molecules secreted into the extracellular fluid (ECF), most responsible for communication within the body.
Cell-Cell Communication
1. Local Communication
Gap Junctions: Direct cytoplasmic connections between adjacent cells. Proteins called connexins form connexons, allowing the passage of ions and small molecules like amino acids, ATP, and cAMP.
Contact-Dependent Signaling (Juxtacrine): Interaction between membrane molecules of two cells. Cell adhesion molecules (CAMs) are important for immune system functions and axonal growth in the nervous system.
Autocrine & Paracrine Signaling:
Autocrine: Acts on the same cell that secretes the signal.
Paracrine: Diffuses to neighboring cells. Examples: histamine, cytokines, eicosanoids.
2. Long-Distance Communication
Nervous System: Combination of chemical and electrical signals. Neurons release neurocrine molecules, such as:
Neurotransmitters: Rapid, diffuse across small gaps.
Neuromodulators: Act slowly, often as autocrine or paracrine signals.
Neurohormones: Released into blood for widespread distribution.
Endocrine System: Releases hormones into the blood, which are distributed to target tissues.
Signal Transduction
Signals must be recognized by specific receptors on target cells.
Steps of signaling:
Signal binding to receptor.
Signal transduction (cascade of intracellular signaling events).
Activation of intracellular signaling pathways (e.g., ion channel opening, kinase activation).
Response by the target cell.
Termination of the signal.
Receptor Proteins
Intracellular vs. Membrane Receptors
Intracellular Receptors:
For lipophilic signals (like steroids) that diffuse across the membrane.
Alter gene transcription and trigger slower responses (hours).
Membrane Receptors:
For lipophobic signals (e.g., peptides, proteins).
Trigger rapid responses through signal cascades (seconds to minutes).
Types of Membrane Receptors
G-Protein Coupled Receptors (GPCRs):
Cross the membrane seven times.
Activate ion channels or enzymes (adenylyl cyclase, phospholipase C).
Receptor Enzymes:
Ligand binding activates intrinsic enzymes.
Examples: tyrosine kinase (for growth factors), guanylyl cyclase (for nitric oxide).
Integrin Receptors:
Span the membrane and connect extracellular matrix to the cytoskeleton.
Mediate cellular adhesion and signaling.
Second Messengers
cAMP: Activated by adenylyl cyclase, amplifies the signal.
cGMP: Produced by guanylyl cyclase, similar in function to cAMP.
Inositol Triphosphate (IP3) and Diacylglycerol (DAG): Generated by phospholipase C, involved in releasing calcium from intracellular stores.
Ca²⁺: Acts as a secondary messenger in many cellular processes.
Calcium as an Intracellular Messenger
Enter through voltage-gated, ligand-gated, or mechanically-gated channels.
Released from intracellular stores, such as the endoplasmic reticulum (ER).
Gaseous Messengers
Nitric Oxide (NO): Produced by endothelial cells; causes vasodilation.
Carbon Monoxide (CO): Regulates smooth muscle and neural tissues.
Hydrogen Sulfide (H2S): Modulates the cardiovascular system to relax blood vessels.
Modulation of Signal Pathways
Receptor Isoforms: One ligand may activate different receptors leading to different responses.
Agonists and Antagonists:
Agonists: Bind to receptors and mimic the natural ligand’s action.
Antagonists: Bind to receptors and block the natural ligand’s effects.
Upregulation and Downregulation:
Upregulation: Increase in receptor number in response to low signal concentration.
Downregulation: Decrease in receptor number in response to high signal concentration.
Homeostasis
Definition: The maintenance of a relatively stable internal environment.
Cannon’s Postulates (1929):
Nervous Regulation: The nervous system regulates the internal environment.
Tonic Control: A signal is always present, but its intensity can vary (e.g., heart rate modulation by sympathetic and parasympathetic systems).
Antagonistic Control: Different signals control opposite effects on a system (e.g., insulin vs. glucagon in blood glucose regulation).
One Chemical Signal, Different Effects: One signal can have different effects in different tissues (e.g., epinephrine constricts or dilates blood vessels via different receptors).
Homeostatic Control Mechanisms
Control Mechanisms:
Local Control: Restricted to a specific tissue.
Long-Distance Reflex Control: Involves widespread body responses mediated by the nervous or endocrine system.
Feedback Loops
Negative Feedback: A response counteracts the stimulus, bringing the system back to the setpoint (e.g., blood glucose regulation by insulin).
Positive Feedback: A response amplifies the stimulus, driving the system away from the setpoint (e.g., childbirth through uterine contractions).
Reflex Control Pathways
Steps in Reflex Control:
Stimulus: A change in the regulated variable.
Sensor: Detects the stimulus.
Integrating Center: Processes the information and decides on an appropriate response.
Effector: The organ or tissue that carries out the response.
Response: A change in the regulated variable that counteracts the stimulus.
Neural vs. Endocrine Reflexes
Neural Reflexes: Fast, precise, short duration, use electrical signals.
Endocrine Reflexes: Slower, widespread, longer duration, use chemical signals.
Blood Glucose Regulation Example
Beta Cells of the Pancreas: Release insulin in response to high blood glucose.
Insulin Secretion: Triggered by the closure of KATP channels, leading to cell depolarization, calcium influx, and exocytosis of insulin.
Exam 2
Chapter 7
1. Hormones: Overview and Functions
Definition of Hormones:
Hormones are chemical signals that are:
Secreted by a cell or group of cells.
Transported by the blood to distant target tissues.
Bind to specific receptors on target cells, activating a physiological response.
They work at very low concentrations (nM or pM).
Functions of Hormones:
Control enzymatic reactions.
Transport of ions or molecules across cell membranes.
Regulate gene expression and protein synthesis.
2. Overview of Major Hormones and Their Functions
Pineal Gland:
Melatonin: Regulates circadian rhythms and immune function.
Thyroid Gland:
T3 (Triiodothyronine) & T4 (Thyroxine): Control metabolism, growth, and development.
Calcitonin: Regulates plasma calcium levels.
Parathyroid Gland:
Parathyroid hormone (PTH): Regulates plasma calcium and phosphate levels.
Adrenal Gland:
Cortex:
Aldosterone: Maintains sodium and potassium balance (homeostasis).
Cortisol: Involved in the stress response.
Androgens: Affect sex drive in women.
Medulla:
Epinephrine: Plays a key role in the fight-or-flight response.
Norepinephrine: Also involved in fight-or-flight responses.
Pancreas:
Insulin: Lowers blood glucose.
Glucagon: Raises blood glucose.
Somatostatin: Inhibits insulin and glucagon release.
Testes (Male):
Androgens: Responsible for sperm production and the development of secondary sex characteristics.
Ovaries (Female):
Estrogen: Regulates egg production and secondary sex characteristics.
Progesterone: Regulates reproductive processes.
3. Hormone Mechanism of Action
Hormone Action:
Hormones bind to specific target receptors on cells and trigger biochemical responses.
One hormone can act on multiple tissues, with different effects depending on the tissue type (e.g., insulin).
Cell signaling pathways can vary based on the type of receptor and the intracellular signaling cascade activated.
Hormone action must be of limited duration to maintain homeostasis.
Bloodstream degradation: Hormones are broken down by enzymes in the liver and kidneys.
Target cells: Hormones can also be degraded within the target cell by enzymes or through endocytosis.
4. Hormone Classification and Types
Three Main Hormone Classes:
Peptide/Protein Hormones:
Examples: Insulin, glucagon, growth hormone.
Synthesis:
Preprohormone (inactive precursor).
Prohormone (smaller, inactive).
Active hormone (functional form).
Storage: Stored in vesicles, ready for release upon signal.
Steroid Hormones:
Examples: Cortisol, aldosterone, estrogen.
Synthesis: Derived from cholesterol, synthesized on demand, not stored in vesicles.
Released: Upon synthesis, steroid hormones diffuse across the cell membrane.
Amino Acid-Derived (Amine) Hormones:
Examples: Melatonin (from tryptophan), catecholamines (epinephrine, norepinephrine from tyrosine), thyroid hormones (T3, T4).
Derived from: Modifications of single amino acids (e.g., tryptophan or tyrosine).
5. Hormone Synthesis, Storage, and Release
Peptide/Protein Hormones:
Synthesized as preprohormones, which are cleaved into smaller prohormones.
Stored in secretory vesicles within the endocrine cell.
Release: Upon stimulation, stored hormones are secreted via exocytosis.
Steroid Hormones:
Synthesized on demand from cholesterol.
Not stored in vesicles but synthesized and released immediately after production.
Amino Acid-Derived Hormones:
Synthesized from amino acids like tryptophan and tyrosine.
Stored and released in a manner similar to peptide hormones.
6. Mechanisms of Hormone Action (Peptide vs. Steroid)
Peptide Hormones:
Water-soluble (lipophobic).
Bind to cell surface receptors.
Initiate signal transduction pathways (e.g., open/close ion channels, activate enzymes).
May induce rapid effects (minutes).
Can also trigger longer-lasting effects (e.g., gene expression).
Steroid Hormones:
Lipophilic (fat-soluble).
Cross the cell membrane and bind to cytoplasmic/nuclear receptors.
Alter gene transcription to produce long-term effects.
Can also have rapid, non-genomic effects through membrane-bound receptors.
7. Transport and Half-Life of Hormones
Peptide Hormones:
Solubility: Water-soluble, transported freely in the bloodstream.
Half-life: Short (minutes), degraded quickly.
Steroid Hormones:
Solubility: Lipid-soluble, bound to carrier proteins in the bloodstream.
Half-life: Long (e.g., cortisol has a half-life of 60-90 minutes).
Amino Acid-Derived Hormones:
Solubility: Generally water-soluble, some (e.g., thyroid hormones) are bound to carrier proteins.
Half-life: Varies depending on type (short for catecholamines, longer for thyroid hormones).
8. Control of Hormone Release
Endocrine Reflexes:
Simple Endocrine Reflexes: The endocrine gland itself acts as both sensor and integrating center. Example: insulin secretion in response to blood glucose.
Neurohormones: Released by neurons into the bloodstream. Examples include:
Catecholamines (from the adrenal medulla).
Hypothalamic neurohormones (regulate anterior pituitary).
Posterior pituitary hormones (ADH and oxytocin).
Neurohormones:
Catecholamines: Produced by adrenal medulla (epinephrine and norepinephrine).
Hypothalamic neurohormones: Released into the blood to control anterior pituitary hormone release (e.g., GnRH, TRH).
Posterior Pituitary Neurohormones: ADH (vasopressin), Oxytocin.
9. Pituitary Gland Function
Posterior Pituitary (Neurohypophysis):
Composed of neural tissue.
Stores and releases hormones made in the hypothalamus.
ADH (Vasopressin): Regulates kidney function and water balance.
Oxytocin: Involved in uterine contractions during labor and milk ejection during lactation.
Anterior Pituitary (Adenohypophysis):
Composed of epithelial tissue.
Releases six key hormones:
Prolactin (PRL): Controls milk production.
Growth Hormone (GH): Affects growth and metabolism.
FSH and LH: Control reproductive functions in ovaries and testes.
TSH: Stimulates thyroid hormone release.
ACTH: Stimulates cortisol production in adrenal cortex.
10. Endocrine Pathologies
Hormone Excess:
Hypersecretion: Caused by tumors (e.g., adenomas) or exogenous hormone administration.
Can lead to exaggerated hormone effects.
Hormone Deficiency:
Hyposecretion: Underproduction of hormones (e.g., adrenal cortex atrophy).
Can result from gland damage (e.g., tuberculosis affecting adrenal glands).
Primary vs. Secondary Pathologies:
Primary Pathology: The issue originates in the final endocrine gland (e.g., tumor in adrenal cortex).
Secondary Pathology: The issue originates in the anterior pituitary (e.g., damage leading to reduced ACTH secretion).
Hypercortisolism:
Symptoms: Hyperglycemia, tissue wasting, moon face, and fat deposition in the trunk.
Chapter 8
Neurons: Cellular and Network Properties
2: Overview of Nervous System Organization
Central Nervous System (CNS)
Brain
Spinal Cord
Peripheral Nervous System (PNS)
Somatic Nervous System (SNS)
Autonomic Nervous System (ANS)
Sympathetic Nervous System
Parasympathetic Nervous System
Enteric Nervous System
Afferent Division (Sensory)
Efferent Division (Motor)
3: Cells of the Nervous System
Neurons
Electrically excitable cells that process and transmit information through electrical and chemical signals.
Glia
Support, insulate, and nourish neighboring neurons (~90% of brain cells).
Types of Glial Cells: Astrocytes, Oligodendrocytes, Microglia, Ependymal cells, Schwann cells, Satellite cells.
4: Basic Structure of Neurons
Neuron Functions:
Receive & integrate inputs
Generate nerve impulse (action potential)
Conduct nerve impulse
Main Components:
Dendrites: Receive signals
Soma: Cell body
Axon: Transmits signals
Axon Hillock: Initiates action potentials
Axon Terminals: Synaptic transmission
5: Myelin and Axonal Transport
Myelin Sheath: Insulates the axon and speeds signal transmission.
Nodes of Ranvier: Gaps in myelin for ion exchange.
Axonal Transport:
Anterograde: Soma to axon
Retrograde: Axon to soma
Motor Proteins (Kinesin for anterograde, Dynein for retrograde) transport material via ATP.
6: Axon Terminals & Synapse
Axon Terminals: Contain synaptic vesicles and mitochondria.
Synapse: Gap between neurons or between a neuron and a target cell.
Chemical Synapses: Electrical signal converted to chemical signal via neurotransmitters.
Electrical Synapses: Faster, bidirectional, via gap junctions.
7: Classification of Neurons
Structural Categories:
Multipolar: Most common, in CNS
Pseudounipolar: One axon with peripheral and central branches
Anaxonic: No distinct axon, found in CNS
Bipolar: Two processes, in sensory systems
Functional Categories:
Motor Nerves (Efferent)
Sensory Nerves (Afferent)
Mixed Nerves: Both sensory and motor functions
8: Glial Cells
CNS Glia: Astrocytes, Oligodendrocytes, Microglia, Ependymal cells
PNS Glia: Schwann cells, Satellite cells
Functions:
Support and nourish neurons
Myelination
Clean up debris (Microglia)
Maintain blood-brain barrier (Astrocytes)
9: Myelin-Forming Glia
Oligodendrocytes (CNS): Each cell myelinates multiple axons.
Schwann Cells (PNS): Each cell myelinates one axon.
Both provide insulation to speed up action potential transmission.
10: Ion Channels and Membrane Potential
Resting Membrane Potential: Around -70 mV
K+ has a high permeability, Na+ enters slowly.
Nernst Equation: Predicts equilibrium potential for an ion based on concentration.
Goldman-Hodgkin-Katz Equation: Accounts for multiple ions and their permeabilities.
11: Action Potentials Overview
Graded Potentials: Small, local changes in membrane potential.
Can be excitatory (depolarizing) or inhibitory (hyperpolarizing).
Travel short distances, lose strength.
Action Potentials: Large, uniform depolarizations that travel long distances without diminishing.
12: Phases of Action Potential
Rising Phase: Depolarization due to Na+ influx.
Overshoot: Inside the neuron becomes positive.
Falling Phase: Repolarization due to K+ efflux.
Undershoot: Hyperpolarization before returning to resting potential.
13: Action Potential Propagation
Action potentials propagate along the axon, from the trigger zone to the axon terminals.
Refractory Periods: Ensure one-way direction and limit firing rate.
Absolute Refractory Period: No action potential can occur.
Relative Refractory Period: Requires a stronger stimulus.
14: Factors Influencing Action Potential Conduction
Diameter of Axon: Larger diameter = faster conduction.
Myelination: Myelin speeds up conduction by reducing ion leakage.
Saltatory Conduction: Action potentials "jump" between nodes of Ranvier.
15: Synaptic Communication
Chemical Synapses: Transmission of signals via neurotransmitters.
Electrical Synapses: Direct transfer of electrical signals through gap junctions.
Neurotransmitters: Chemical signals including Amines, Amino Acids, Peptides, Purines, Gases.
16: Neurocrine Classes
Amines: Dopamine, Serotonin, Norepinephrine.
Amino Acids: Glutamate (excitatory), GABA (inhibitory).
Peptides: Substance P, Opioid peptides.
Purines/Gases: ATP, Nitric oxide.
17: Ionotropic vs Metabotropic Receptors
Ionotropic Receptors: Ligand-gated ion channels for fast responses.
Metabotropic Receptors: GPCRs that activate second messengers for slower responses.
18: Neurotransmitter Synthesis and Action
Neurotransmitter Synthesis: In nerve cell body (polypeptides), axon terminal.
Release and Termination: Neurotransmitters are released into synaptic cleft and their action is terminated by reuptake or enzymatic degradation.
19: Synaptic Integration
Divergence: One neuron sends signals to many others.
Convergence: Multiple neurons send signals to a single neuron.
Integration of all inputs determines if an action potential will be initiated.
20: Summation of Graded Potentials
Spatial Summation: Multiple stimuli from different locations combine to produce a response.
Temporal Summation: Multiple stimuli from the same location combine over time.
Chapter 9
1. Emergent Properties of Neural Systems in Humans and Other Organisms
Emergent Properties refer to complex behaviors or abilities that arise from the interaction of simpler components within a system. In neural systems, this means that individual neurons and circuits interact to produce functions that cannot be predicted by studying the neurons in isolation.
Examples:Consciousness: A prime example of an emergent property, consciousness arises from the complex interactions between neurons across various brain regions, including the cerebral cortex and thalamus. It is not a property of any one neuron but a result of coordinated activity across a network of neurons.
Reflexes: In organisms like Cnidarians (e.g., jellyfish), simple neural networks produce reflexive actions like swimming. In humans, more complex neural circuits allow for reflexes such as the patellar reflex, which involves rapid, involuntary movements of muscles in response to stimuli.
Learning and Memory: The ability to store and recall information depends on changes in synaptic strength and the reorganization of neural circuits, especially in regions like the hippocampus and prefrontal cortex. These capabilities are emergent properties of neural plasticity and networked processing.
2. Complexity of Nervous Systems from Cnidarians to Mammals
Cnidarians:
Simple nerve net that lacks a central nervous system (CNS). Neurons are arranged in a decentralized manner, allowing basic, automatic reflexive behaviors. Examples include jellyfish, which respond to environmental stimuli in a simple, coordinated way through this nerve net.
Flatworms (Platyhelminthes):
Cephalization occurs, where neurons begin to concentrate in the head region, forming simple ganglia that can process sensory input and control movement. This allows for more directed and coordinated behavior.
Annelids and Arthropods:
These animals exhibit a more centralized nervous system, with a ventral nerve cord running along the body. Ganglia in each segment allow more complex reflexes and behaviors. Arthropods, like insects, show complex behaviors like flight and navigation.
Vertebrates (Mammals):
Highly centralized and organized CNS with a well-defined brain and spinal cord. The vertebrate brain has specialized regions like the cerebrum, cerebellum, diencephalon, and brainstem for processing complex sensory input, voluntary movement, and higher cognitive functions. This complexity allows for advanced behaviors such as problem-solving, language, and social interactions.
3. Gray Matter, White Matter, Tracts, and Nuclei in the CNS
Gray Matter:
Definition: Consists of neuron cell bodies, dendrites, and unmyelinated axons.
Function: Primarily involved in processing and integrating sensory and motor information.
Location: Found in the outer layers of the brain (cortex) and in the central regions of the spinal cord.
White Matter:
Definition: Composed of myelinated axons, which are bundled into tracts for faster signal transmission.
Function: Facilitates rapid communication between different regions of the CNS.
Location: Found beneath the gray matter in the brain and forming the outer regions of the spinal cord.
Tracts:
Definition: Bundles of myelinated axons that transmit information between different areas of the brain or between the brain and the spinal cord.
Nuclei:
Definition: Clusters of neuron cell bodies in the CNS, typically involved in a specific function, such as the basal ganglia involved in motor control.
4. Membranes and Structures Enclosing the Brain (Skull Inward)
Skull: The cranial bones protect the brain from physical damage.
Dura Mater: The tough, outermost membrane; provides protection and forms the dural sinuses for venous blood drainage.
Arachnoid Mater: The middle membrane, which is web-like and houses blood vessels. It contains a space filled with cerebrospinal fluid (CSF).
Pia Mater: The innermost membrane that is tightly adhered to the brain and spinal cord, providing structural support and containing blood vessels.
Subarachnoid Space: The space between the arachnoid and pia mater where CSF circulates, cushioning the brain and spinal cord.
5. Formation, Distribution, and Functions of Cerebrospinal Fluid (CSF)
Formation:
CSF is produced by the choroid plexus in the ventricles of the brain, specifically in the lateral ventricles, third ventricle, and fourth ventricle.
Distribution:
CSF circulates through the ventricular system (lateral, third, and fourth ventricles), the subarachnoid space, and the central canal of the spinal cord.
Functions:
Cushioning: Protects the brain from mechanical injury.
Homeostasis: Helps regulate the chemical environment of the CNS by maintaining the balance of ions and removing waste products.
Nutrient Delivery: Supplies nutrients to the brain and spinal cord.
6. Blood-Brain Barrier (BBB)
Structure: The BBB is formed by tightly joined endothelial cells lining the brain's capillaries, creating a selective permeability barrier.
Function:
Protects the brain from harmful substances in the blood, such as toxins and pathogens.
Regulates the entry of ions, nutrients, and gases to maintain homeostasis.
Restricts the entry of larger molecules and water-soluble compounds while allowing lipid-soluble molecules (e.g., oxygen and carbon dioxide) to pass freely.
7. Organization of the Spinal Cord
Ascending Tracts: Carry sensory information from the body to the brain (e.g., spinothalamic tract, which transmits pain and temperature sensations).
Descending Tracts: Carry motor commands from the brain to the muscles (e.g., corticospinal tract, which is involved in voluntary motor control).
Columns: Bundles of tracts within the spinal cord. The dorsal column transmits sensory information, while the ventral column transmits motor information.
Dorsal Root Ganglia: Clusters of sensory neuron cell bodies that reside outside the spinal cord. These neurons transmit sensory information to the CNS.
Dorsal Horns: Contain sensory interneurons that receive information from the sensory neurons.
Ventral Horns: Contain motor neurons that send information to muscles.
Dorsal and Ventral Roots: The dorsal roots bring sensory information into the spinal cord, while the ventral roots carry motor signals out of the spinal cord.
Propriospinal Tracts: Interconnect different segments of the spinal cord, coordinating complex motor patterns and reflexes.
Spinal Nerves: Formed from the merging of the dorsal and ventral roots, these nerves carry both sensory and motor information to and from the body.
8. Major Subdivisions of the Brain
Cerebrum:
Largest part of the brain, divided into two hemispheres, responsible for higher cognitive functions such as reasoning, learning, and voluntary movement. Key regions include:
Frontal Lobe: Motor control, decision-making, problem-solving, and speech production.
Parietal Lobe: Sensory processing, spatial awareness, and integration of sensory input.
Occipital Lobe: Visual processing, interpreting input from the eyes.
Temporal Lobe: Auditory processing, memory, language comprehension, and emotional processing.
Cerebellum:
Located at the back of the brain, it coordinates voluntary movement, balance, and posture. It helps fine-tune motor activities.
Diencephalon:
Includes the thalamus, which acts as a sensory relay station, and the hypothalamus, which regulates homeostasis, emotion, and autonomic functions (e.g., temperature regulation, hunger).
Brainstem:
Includes the midbrain, pons, and medulla oblongata, responsible for basic life functions like breathing, heart rate, and swallowing, as well as the relay of sensory and motor signals.
9. Four Lobes of the Cerebral Cortex
Frontal Lobe:
Responsible for higher cognitive functions like reasoning, planning, emotional regulation, and motor control.
Parietal Lobe:
Processes sensory information related to touch, temperature, and pain, as well as spatial and body awareness.
Occipital Lobe:
Primarily responsible for visual processing and the integration of visual information.
Temporal Lobe:
Involved in auditory processing, memory formation, and language comprehension. The hippocampus is key in storing long-term memories.
Conclusion
The central nervous system (CNS) is a complex and highly organized system that enables humans and other organisms to interact with their environment, process information, and perform vital functions. From the simplest nervous systems in cnidarians to the highly complex human brain, the evolution of the CNS allows for advanced behaviors, cognition, and coordination. Understanding its structure, function, and organization is fundamental for studying neural function and the physiological processes underlying health and disease.
Chapter 11
1. Physiological Role of the Autonomic Division and Its Branches
The autonomic nervous system (ANS) regulates involuntary functions that maintain homeostasis, such as heart rate, digestion, respiratory rate, and blood pressure. It is divided into two major branches: sympathetic and parasympathetic.
Sympathetic Division:
Known as the "fight or flight" system, it prepares the body for action in stressful situations.
Functions:
Increases heart rate, dilates pupils, and increases blood flow to muscles.
Inhibits digestion and releases glucose for energy.
Activates sweat glands and dilates bronchioles to increase airflow to the lungs.
Parasympathetic Division:
Known as the "rest and digest" system, it promotes relaxation and conservation of energy.
Functions:
Slows heart rate, constricts pupils, and stimulates digestion.
Promotes urination and stimulates salivation.
Both branches often work antagonistically to maintain a balance in body functions, such as regulating blood pressure or body temperature.
2. Anatomy and Chemical Communication of Sympathetic and Parasympathetic Branches
Sympathetic Branch:
Anatomy:
Originates from the thoracolumbar region of the spinal cord (T1-L2). The sympathetic ganglia are located in a sympathetic chain running along the spinal cord and in some collateral ganglia near major organs.
Neurotransmitters:
Pre-ganglionic neurons release acetylcholine (ACh), which binds to nicotinic receptors on post-ganglionic neurons.
Post-ganglionic neurons release norepinephrine (NE) at target organs, except for sweat glands, where they release acetylcholine (ACh).
Receptors: Alpha (α) and beta (β) adrenergic receptors on target cells.
Parasympathetic Branch:
Anatomy:
Originates from the craniosacral region (brainstem and sacral spinal cord). The ganglia are located close to or within the target organs.
Neurotransmitters:
Pre-ganglionic neurons release acetylcholine (ACh), which binds to nicotinic receptors on post-ganglionic neurons.
Post-ganglionic neurons also release acetylcholine (ACh), which binds to muscarinic receptors on target organs.
Receptors: Muscarinic receptors on target cells.
3. Synthesis and Breakdown of Autonomic Neurotransmitters
Sympathetic Neurotransmitters:
Norepinephrine (NE) is the main neurotransmitter of the sympathetic post-ganglionic neurons.
Synthesis:
Tyrosine is converted into dopamine and then into norepinephrine by enzymes dopamine β-hydroxylase and phenylethanolamine-N-methyltransferase (PNMT).
Breakdown:
Monoamine oxidase (MAO) and catechol-O-methyltransferase (COMT) break down norepinephrine in the synaptic cleft and within neurons.
Parasympathetic Neurotransmitters:
Acetylcholine (ACh) is the neurotransmitter for both pre- and post-ganglionic parasympathetic neurons.
Synthesis:
Choline is combined with acetyl-CoA to form acetylcholine by the enzyme choline acetyltransferase (ChAT).
Breakdown:
Acetylcholinesterase (AChE) rapidly breaks down ACh in the synaptic cleft, leading to cessation of its action.
4. Structure and Secretions of the Adrenal Medulla
Structure:
The adrenal medulla is the inner part of the adrenal glands, located on top of the kidneys. It is part of the sympathetic nervous system and functions as an endocrine organ.
It is composed of chromaffin cells that secrete catecholamines (primarily epinephrine (adrenaline) and norepinephrine (noradrenaline)).
Secretions:
The adrenal medulla secretes 80% epinephrine and 20% norepinephrine into the bloodstream in response to sympathetic stimulation.
These hormones act as hormones and neurotransmitters, inducing widespread physiological changes (e.g., increasing heart rate, dilating airways, and mobilizing energy stores).
5. Structure of the Neuromuscular Junction
Definition: The neuromuscular junction (NMJ) is the synapse between a somatic motor neuron and a muscle fiber.
Structure:
The axon terminal of the motor neuron contains synaptic vesicles filled with acetylcholine (ACh).
The motor end plate of the muscle fiber has nicotinic ACh receptors embedded in the sarcolemma.
The synaptic cleft is the small gap between the neuron and the muscle.
Function:
ACh is released from the axon terminal into the synaptic cleft upon action potential arrival.
ACh binds to nicotinic receptors on the muscle, causing depolarization and leading to muscle contraction.
6. Comparison of the Anatomy, Neurotransmitters, and Receptors of the Somatic Motor, Sympathetic, and Parasympathetic Divisions
Somatic Motor Division:
Anatomy: A single neuron extends from the CNS directly to the target muscle. The cell body resides in the CNS, and the axon extends to the muscle.
Neurotransmitter: Acetylcholine (ACh).
Receptors: Nicotinic receptors on muscle fibers.
Sympathetic Division:
Anatomy: Two neurons in series: pre-ganglionic neurons originate in the thoracolumbar spinal cord and synapse in sympathetic ganglia. Post-ganglionic neurons then innervate target tissues.
Neurotransmitter: Norepinephrine (NE) at target organs, acetylcholine (ACh) at sweat glands.
Receptors: Alpha (α) and beta (β) adrenergic receptors on target cells.
Parasympathetic Division:
Anatomy: Two neurons in series: pre-ganglionic neurons originate in the craniosacral region (brainstem and sacral spinal cord) and synapse in ganglia near target organs. Post-ganglionic neurons release neurotransmitters directly at target tissues.
Neurotransmitter: Acetylcholine (ACh).
Receptors: Muscarinic receptors on target cells.
Summary
The efferent division of the nervous system is crucial for regulating the body’s involuntary functions and voluntary muscle movements. The autonomic nervous system (ANS) controls processes such as heart rate, digestion, and blood pressure, using its sympathetic and parasympathetic branches. The sympathetic branch prepares the body for action through the release of norepinephrine, while the parasympathetic branch conserves energy using acetylcholine. Somatic motor neurons, which control voluntary muscles, also use acetylcholine but differ in anatomy as they involve a single motor neuron. The neuromuscular junction plays a critical role in skeletal muscle contraction. Additionally, the adrenal medulla secretes epinephrine and norepinephrine, further influencing the sympathetic responses. Understanding the physiology and chemical communication within these systems is fundamental for comprehending how the body responds to various internal and external stimuli.
MUSCLE PHYSIOLOGY: COMPREHENSIVE STUDY NOTES
TYPES OF MUSCLE TISSUE
Three Major Muscle Types
Skeletal Muscle
Function: Body movement
Control: Voluntary (somatic motor neurons)
Structure: Striated
Cardiac Muscle
Function: Moves blood through circulatory system
Control: Involuntary (autonomic innervation, spontaneous contraction)
Structure: Striated
Smooth Muscle
Function: Internal organs and tubes
Control: Involuntary (autonomic innervation, spontaneous, endocrine)
Structure: Non-striated
Muscle Fiber Characteristics
SKELETAL MUSCLE STRUCTURE
Hierarchical Organization
Muscle → Fascicles → Muscle fibers → Myofibrils → Myofilaments
Muscle fiber = single muscle cell (long, cylindrical with many nuclei)
Satellite cells = muscle stem cells
Myofibrils = organized bundles of contractile and elastic proteins
Muscle Fiber Anatomy
Sarcolemma = muscle cell membrane
Sarcoplasm = muscle cell cytoplasm
Sarcoplasmic reticulum (SR) = specialized endoplasmic reticulum that stores Ca²⁺
Has longitudinal tubules with enlarged end regions called terminal cisternae
T-tubules = extensions of sarcolemma that penetrate into the cell
Allow action potentials to reach internal structures
Associate with terminal cisternae of SR
CONTRACTILE PROTEINS
Major Protein Types
Contractile proteins (thick & thin filaments)
Myosin (thick filament)
Actin (thin filament)
Regulatory proteins
Tropomyosin
Troponin
Giant accessory proteins
Titin
Nebulin
Myosin (Thick Filaments)
Structure: 2 identical protein chains
Each with 1 large heavy chain (tail-hinge-head)
2 smaller light chains wrapped around lower neck region
Heavy chain on heads: motor domain (myosin ATPase) with actin binding sites
About 250 myosin molecules join to create one thick filament
Actin (Thin Filaments)
G-actin = Actin monomer
F-actin = Actin polymer
Thin filament = 2 F-actin polymers twisted together
Accessory Proteins
Titin
Stabilizes position of contractile elements
Provides elasticity to return stretched muscles to resting length
Nebulin
Inelastic protein
Aligns actin filaments
SARCOMERE STRUCTURE
Sarcomere = contractile unit of myofibril (one repeat of the banding pattern)
Z disks = attachment sites for thin filaments
I band = light band containing only thin filaments (actin)
A band = dark band containing thick filaments (myosin) and overlapping thin filaments
H zone = clear area in middle of A band (thick filaments only)
M line = middle line where thick filaments attach
MUSCLE CONTRACTION
Key Terms
Muscle tension: Force created by contracting muscle
Load: Weight or force opposing contraction
Contraction: Creation of tension in muscle (ATP-dependent)
Relaxation: Release of tension
Muscle twitch: One contraction-relaxation cycle in intact muscle
Sliding Filament Theory
Theory explaining contraction at molecular level (Huxley & Niedergerke, 1954)
During contraction:
Filaments don't change length but slide past each other
Sarcomere shortens
Z disks move closer together
I band and H zone nearly disappear
A band remains constant length
Cross-Bridge Cycle
Myosin head binds to actin (forming cross-bridge)
Power stroke: Myosin heads push thin filaments toward center of sarcomere
ATP binding causes myosin to release actin
ATP hydrolysis (myosin ATPase) places myosin head in "cocked position"
Cycle repeats
Role of Calcium in Contraction
At rest, tropomyosin blocks myosin binding sites on actin
Troponin (complex of 3 proteins) controls positioning of tropomyosin
When Ca²⁺ binds to troponin:
Tropomyosin moves
Myosin binding sites on actin are exposed
Cross-bridge cycling can occur
Rigor State
Myosin heads tightly bound to actin
No nucleotides (ATP/ADP) bound to myosin
Rigor mortis: After death, ATP is exhausted → myosin remains bound to actin in rigor state
EXCITATION-CONTRACTION COUPLING
Process
ACh released by motor neuron
ACh binds receptors → Action potential in muscle fiber
Action potential travels along T-tubules
Dihydropyridine (DHP) receptors sense voltage change
GgDHP receptors trigger ryanodine receptors (RyR)
Ca²⁺ released from sarcoplasmic reticulum
Ca²⁺ binds to troponin
Contraction occurs
Relaxation Process
Ca²⁺ dissociates from troponin
Ca²⁺ pumped back into SR by Ca²⁺-ATPase
Tropomyosin blocks myosin binding sites
Contraction ends
Timing
Latent period: Time required for Ca²⁺ release and binding to troponin
Contraction phase: Muscle tension increases to maximum
Relaxation phase: Elastic elements return sarcomeres to resting length
ENERGY REQUIREMENTS AND METABOLISM
ATP Uses in Muscle
Contraction: Cross-bridge movement and release
Relaxation: Pump Ca²⁺ back into SR
After E-C coupling: Restore Na⁺ and K⁺ gradients
Energy Storage
ATP stores in muscle are limited (enough for ~8 twitches)
Phosphocreatine: Stores energy from ATP in high-energy bonds
Energy Production Pathways
With oxygen (aerobic):
Glycolysis → Pyruvate oxidation → Citric acid cycle → Oxidative phosphorylation
Yields ~30 ATP per glucose
Can also utilize fatty acids
Without oxygen (anaerobic):
Anaerobic glycolysis → Lactic acid
Only 2 ATP per glucose
Quicker than aerobic metabolism
Used during strenuous exercise
MUSCLE FATIGUE
Central vs. Peripheral Fatigue
Central fatigue: Mechanisms arise in CNS
Peripheral fatigue: Mechanisms arise in neuron or muscle
Fatigue Causes Based on Exercise Type
Extended submaximal exercise:
Depletion of glycogen stores (could affect Ca²⁺ release from SR)
Short-duration maximal exercise:
Increased levels of inorganic phosphate (Pi)
May slow Pi release from myosin → alter power stroke
Decreased Ca²⁺ release (calcium phosphate formation)
Maximal exercise:
K⁺ leaves muscle fiber → increased extracellular [K⁺] → alteration of membrane potential
Changes Na⁺/K⁺ ATPase activity
SKELETAL MUSCLE FIBER TYPES
Classification by Speed and Fatigue Resistance
Slow-Twitch (ST or Type I)
Twitch may last up to 10 times longer
Used constantly (maintain posture, walking)
Rely primarily on oxidative phosphorylation
More resistant to fatigue
More mitochondria and blood vessels
Higher myoglobin content ("red muscle")
Fast-Twitch Oxidative-Glycolytic (FOG or Type IIA)
Develop tension 2-3 times faster than ST
Twitch lasts about 7.5 msec
Use both oxidative and glycolytic metabolism
Used occasionally
Intermediate fatigue resistance
Fast-Twitch Glycolytic (FG or Type IIB/IIX)
Split ATP more rapidly
Pump Ca²⁺ into SR more rapidly
Rely primarily on glycolytic metabolism
More easily fatigued
Good for fine quick movements (e.g., playing piano)
FORCE OF CONTRACTION
Single Twitches vs. Summation
Single twitches: Long interval between action potentials → complete relaxation
Summation: Shorter interval between action potentials → incomplete relaxation between contractions
Tetanus
Incomplete/unfused tetanus: Partial relaxation between contractions
Complete/fused tetanus: No relaxation between contractions (maximal contraction)
Tension increases with increased firing rate from motor neuron
MOTOR UNITS
Motor unit: One somatic motor neuron and all muscle fibers it innervates
Muscle fibers in a motor unit are of the same type
Each motor unit contracts in all-or-none manner
A muscle may have many motor units of different types
Motor Unit Recruitment
Force variation by:
Type of active motor units
Number of motor units that respond
Recruitment order (size principle):
Slow-twitch (lowest threshold) → WEAK STIMULUS
Fast-twitch oxidative-glycolytic (medium threshold) → STRONGER STIMULUS
Fast-twitch glycolytic (highest threshold) → STRONGEST STIMULUS
SMOOTH MUSCLE
Classifications
By location:
Vascular, gastrointestinal, urinary, respiratory, reproductive, ocular
By contraction pattern:
Phasic: Periodic contraction/relaxation cycles (intestines)
Tonic: Sustained contraction (sphincters, blood vessel wall)
By communication with neighboring cells:
Single-unit (visceral): Electrically connected via gap junctions
Multi-unit: Not linked, independent
Structural Differences from Skeletal Muscle
Small, spindle-shaped cells with one nucleus
No sarcomeres
No T-tubules but have caveolae (membrane invaginations)
Variable amount of SR, less organized
More actin (10-15 actin:1 myosin ratio)
Longer myosin filaments with heads covering entire surface
Extensive cytoskeleton (intermediate filaments and dense bodies)
More stretching capability
Smooth Muscle Contraction Mechanism
Increase in cytosolic Ca²⁺ (from both SR and extracellular fluid)
Ca²⁺ binds to calmodulin (not troponin)
Ca²⁺-calmodulin complex activates myosin light chain kinase (MLCK)
MLCK phosphorylates myosin light chain (MLC)
Phosphorylation activates myosin ATPase → contraction
Dephosphorylation of MLC by MLC phosphatase (MLCP) → relaxation
Calcium Sources in Smooth Muscle
From SR:
Ryanodine receptor (RyR)
IP₃-receptor channel (IP₃R)
Ca²⁺-induced Ca²⁺ release (CICR)
From extracellular fluid via:
Voltage-gated Ca²⁺ channels
Receptor-operated calcium channels (ROCC)
Mechanically-gated Ca²⁺ channels (stretch-activated)
Contraction Types in Smooth Muscle
Electromechanical coupling: Contraction by electrical signaling
Pharmacomechanical coupling: Contraction by chemical signaling (GPCR → PLC pathway)
Myogenic contraction: Response to stretch without neural/hormonal input
Smooth Muscle Electrical Properties
Can depolarize and hyperpolarize
Membrane potential oscillates
Contraction can occur:
After an action potential
After graded (subthreshold) potential
Without change in membrane potential
Slow-wave potentials: Cyclic depolarization-repolarization
Pacemaker potentials: Regular depolarizations beyond threshold
Smooth Muscle Regulation
Under antagonistic control of sympathetic and parasympathetic branches of ANS
Chemical signals can have different effects on different tissues (e.g., epinephrine α vs β₂)
Paracrine signals:
Nitric oxide (NO) relaxes smooth muscles of blood vessels
Histamine constricts smooth muscle of airways
Force of contraction depends on amount of Ca²⁺ entering the cell
Fine control achieved through recruitment of more fibers
CARDIAC MUSCLE
Characteristics
Striated appearance like skeletal muscle
Shorter branching fibers with one nucleus
Fibers electrically linked via gap junctions (intercalated disks)
Contains T-tubules and sarcoplasmic reticulum
Uses troponin and tropomyosin (like skeletal muscle)
Ca²⁺ from both extracellular fluid and SR
Contraction speed intermediate between skeletal and smooth muscle
Autorhythmic (can initiate contraction without external stimulus)
Under autonomic neural control
Influenced by epinephrine
COMPARISON OF MUSCLE TYPES
KEY CONCEPTS SUMMARY
Muscle Types: Skeletal (voluntary, striated), cardiac (involuntary, striated), and smooth (involuntary, non-striated)
Skeletal Muscle Contraction:
Sliding filament theory - filaments don't change length but slide past each other
Cross-bridge cycling requires ATP
Ca²⁺ signaling via troponin/tropomyosin system
Excitation-contraction coupling links electrical signals to mechanical response
Energy Use in Muscle:
ATP required for contraction, relaxation, and ion balance
Phosphocreatine provides quick energy storage
Aerobic and anaerobic pathways for ATP production
Skeletal Fiber Types:
Slow-twitch (Type I): fatigue-resistant, oxidative
Fast-twitch oxidative-glycolytic (Type IIA): intermediate
Fast-twitch glycolytic (Type IIB/IIX): powerful, easily fatigued
Motor Units and Force Generation:
Force increases with recruitment of additional motor units
Recruitment follows size principle (smallest/slow-twitch first)
Tetanus increases force through temporal summation
Smooth Muscle Contraction:
Ca²⁺-calmodulin-MLCK phosphorylation pathway
Multiple Ca²⁺ sources (SR and extracellular)
Multiple control mechanisms (electrical, chemical, mechanical)
Cardiac Muscle:
Combines features of both skeletal and smooth muscle
Autorhythmic capability
Electrically coupled via gap junctions
Comprehensive Cardiovascular Physiology Lecture Notes
Chapter Overview
Course: BIO 403 - Physiology I
Lecturer: Katerina Tsouma, Ph.D.
Department of Biology, University of Dayton
Cardiovascular System Components
Primary Components
Heart (Pump)
Located in center of thorax
Ventrally positioned between two lungs
Separated by septum into left and right halves
Anatomical Features:
Base
Apex
Encased in tough membranous sac (pericardium)
Pericarditis: Inflammation of the pericardium
Composed mainly of cardiac muscle (myocardium)
Major blood vessels emerge from heart base
Blood Vessels (Vasculature)
Types of Vessels:
Arteries
Arterioles
Capillaries
Venules
Veins
Blood (Fluid)
Composed of:
Cells
Plasma
Primary Function
Transport of materials:
Materials entering the body
Materials transferred between cells
Cellular waste products
Circulatory Circuits
Pulmonary Circuit
Blood pathway between:
Right side of heart
Lungs
Left atrium
Involves blood oxygenation
Systemic Circuit
Pathway between left and right heart sides
Distributes blood throughout body
Portal Systems
Types:
Hepatic
Renal
Hypophyseal
Supplies specific organ systems
Blood Flow Mechanics
Pressure Dynamics
Fundamental Principle: Liquids move from high to low-pressure regions
Pressure Creation:
Heart contracts, creating high pressure
Pressure lost due to friction
Pressure Gradient:
Highest pressure: Aorta
Lowest pressure: Venae cavae
Heart Valves
Atrioventricular (AV) Valves
Right Side: Tricuspid valve
Three flaps
Left Side: Bicuspid (mitral) valve
Two flaps
Structural Details
Chordae tendineae prevent valve eversion
Attached to valve flaps from papillary muscles
Prevent backward blood flow
Semilunar Valves
Pulmonary Valve
Between right ventricle and pulmonary trunk
Aortic Valve
Between left ventricle and aorta
Characteristics:
Three cuplike leaflets each
No connective tendons needed
Cardiac Muscle Cells
Types of Cardiac Muscle Cells
Contractile Cells (99% of cardiac muscle)
Characteristics:
Striated fibers
Organized into sarcomeres
Smaller and uninucleate
Branch and join neighboring cells via intercalated disks
Larger, branching T-tubules
Smaller sarcoplasmic reticulum
Partially depend on extracellular Ca2+
Mitochondria occupy 1/3 cell volume (high energy demand)
Cellular Connections:
Gap junctions provide electrical connection
Desmosomes allow force transfer
Autorhythmic Cells (1% of cardiac muscle)
Pacemaker cells
Characteristics:
Smaller
Fewer contractile fibers
No organized sarcomeres
Spontaneous signal generation (myogenic)
Muscle Cell Comparison
Muscle Types Comparison
Electrical Conduction in Heart
Conduction System
Sinoatrial (SA) Node
Main heart pacemaker
Located in right atrium
Sets baseline heart rhythm (approximately 70 beats per minute)
Atrioventricular (AV) Node
Located on right atrium floor
Slows action potential transmission
Allows atrial contraction before ventricular contraction
Alternative pacemaker (around 50 bpm)
Additional Components
AV bundle (bundle of His)
Purkinje fibers (25-40 bpm pacemaker potential)
Internodal pathway
Action Potential Characteristics
Contractile Cells Action Potential
Phase 0: Depolarization
Na+ influx
Phase 1: Initial repolarization
K+ efflux
Phase 2: Plateau
Ca2+ influx
Decreased K+ efflux
Phase 3: Rapid repolarization
Increased K+ efflux
Phase 4: Resting membrane potential
Unique Characteristics
Longer action potential (200 msec vs. 1-5 msec in other tissues)
Prevents tetanus
Ensures heart muscle relaxation between contractions
Autorhythmic Cells
Use "If" channels (funny current)
Unstable membrane potential
Spontaneous depolarization mechanism
Electrocardiogram (ECG)
Definition
Summed electrical activity of heart cells
Not identical to action potential
Provides information on:
Heart rate
Rhythm
Conduction velocity
Tissue condition
ECG Waves
P-Wave: Atrial depolarization
QRS Complex: Ventricular depolarization
T-Wave: Ventricular repolarization
Einthoven Triangle
Hypothetical triangle around heart
Electrodes placed on arms and left leg
Triangles sides numbered corresponding to electrode leads
Cardiac Cycle
Mechanical Events
Systole: Muscle contraction
Diastole: Muscle relaxation
Cycle Stages
Heart at rest
Ventricular filling
Atrial contraction
Ventricular contraction
Arterial blood ejection
Ventricular relaxation
Heart Sounds
First sound ("Lub"): AV valve closure
Second sound ("Dup"): Semilunar valve closure
Cardiac Output
Key Metrics
Stroke Volume: Blood pumped per ventricle contraction
Cardiac Output: Blood volume per time period
Calculation: Heart Rate × Stroke Volume
Average Values:
Heart Rate: 72 beats/minute
Stroke Volume: 70 mL/beat
Cardiac Output: ~5 L/minute
Factors Affecting Stroke Volume
Muscle fiber length
Contractility
Preload (ventricular wall stretch)
Frank-Starling Law
Autonomic Control
Heart Rate Regulation
Sympathetic Nervous System:
Increases heart rate
Positive inotropic effects
Parasympathetic Nervous System:
Decreases heart rate
Typically dominates tonic control
Additional Physiological Mechanisms
Contractility Factors
Positive Inotropic Agents:
Epinephrine
Norepinephrine
Digitalis
Negative Inotropic Agents: Decrease contractility
Cardiac Glycosides
Examples: Digitoxin, Ouabain
Increase contractility by:
Slowing Ca2+ removal from cytosol
Depressing Na+/K+ ATPase
Increasing intracellular Ca2+
Chapter 15: The Cardiovascular System (Expanded Notes)
Overview
The cardiovascular system is critical for sustaining life by ensuring continuous circulation of blood throughout the body. This circulation enables efficient delivery of oxygen and nutrients to tissues while removing carbon dioxide and metabolic wastes. The system also helps regulate temperature, pH balance, and immune responses.
Key Structural Components
Cardiovascular System Anatomy
Heart:
Acts as the central pump of the circulatory system.
Composed of four chambers:
Two atria (right and left): Receive blood returning to the heart.
Two ventricles (right and left): Pump blood out of the heart.
Rhythmic contractions (heartbeat) create pressure gradients that propel blood through vessels.
The right side pumps deoxygenated blood to the lungs (pulmonary circulation), and the left side pumps oxygenated blood to the rest of the body (systemic circulation).
Blood Vessels:
Form a vast network that transports blood to every part of the body.
Types of vessels:
Arteries: Carry oxygenated blood away from the heart under high pressure.
Arterioles: Small branches of arteries, control blood flow into capillaries.
Capillaries: Microscopic vessels where exchange of gases, nutrients, and waste occurs.
Venules: Collect blood from capillaries and begin the return flow to the heart.
Veins: Carry deoxygenated blood back to the heart; contain valves to prevent backflow.
Blood:
A specialized connective tissue composed of:
Red blood cells (erythrocytes): Carry oxygen using hemoglobin.
White blood cells (leukocytes): Defend against infection.
Platelets (thrombocytes): Aid in blood clotting.
Plasma: The liquid portion, containing water, proteins, hormones, and nutrients.
Directional Flow:
Arteries transport blood away from the heart, while veins carry it back.
Exception: Pulmonary arteries and veins (pulmonary artery carries deoxygenated blood to the lungs, pulmonary vein carries oxygenated blood back to the heart).
Blood Vessel Characteristics
Vessel Wall Structure
Three layers:
Tunica intima: Smooth inner lining of endothelial cells for frictionless flow.
Tunica media: Middle layer of smooth muscle and elastic tissue, regulating vessel diameter.
Tunica externa (adventitia): Outer layer of connective tissue providing structural support.
Functional Adaptations:
Arteries: Thick tunica media to withstand and regulate high-pressure blood flow.
Veins: Thinner walls with larger lumens and valves to prevent backflow of blood.
Capillaries: Extremely thin walls (one endothelial layer) for efficient exchange.
As arteries branch into arterioles, they become less elastic and more muscular, allowing them to control blood distribution and resistance.
Blood Pressure and Flow Dynamics
Blood Pressure Fundamentals
Blood pressure is the force blood exerts on vessel walls.
Measured as:
Systolic pressure: Pressure during heart contraction (~120 mmHg).
Diastolic pressure: Pressure during heart relaxation (~80 mmHg).
Determinants of blood pressure:
Cardiac output (CO): Stroke volume × heart rate.
Peripheral resistance: Primarily influenced by the diameter of arterioles.
Blood volume: Increased volume = increased pressure.
Viscosity of blood: Thicker blood raises resistance.
Elasticity of arteries: Healthy, elastic arteries buffer pressure fluctuations.
Capillary Exchange and Regulation
Capillary Function
Capillaries are the primary sites of nutrient, gas, and waste exchange.
Exchange mechanisms:
Diffusion: Movement of substances from high to low concentration.
Filtration: Movement of fluid out of capillaries due to hydrostatic pressure.
Reabsorption: Return of fluid into capillaries due to osmotic pressure (albumin plays a key role).
Types of Capillaries:
Continuous: Tight junctions; found in muscle, skin, lungs.
Fenestrated: Have pores for filtration (kidneys, intestines).
Sinusoids: Large openings for cell passage (liver, bone marrow, spleen).
Cardiovascular Control Mechanisms
Neural and Hormonal Regulation
Baroreceptor Reflex:
Stretch receptors in the carotid sinuses and aortic arch detect changes in blood pressure.
Signal the brainstem to adjust heart rate and vessel diameter.
Autonomic Nervous System:
Sympathetic: "Fight or flight" response; increases heart rate, contractility, and vasoconstriction.
Parasympathetic: "Rest and digest"; slows heart rate and promotes vasodilation.
The medullary cardiovascular center integrates signals and coordinates responses.
Hormonal influences:
Adrenaline (epinephrine): Increases heart rate and cardiac output.
Antidiuretic hormone (ADH): Promotes water retention, increasing blood volume.
Renin-angiotensin-aldosterone system (RAAS): Increases blood pressure via vasoconstriction and water retention.
Factors Affecting Blood Pressure
Physiological and External Factors
Cardiac Output: Increased CO elevates blood pressure.
Peripheral Resistance: Higher resistance raises pressure; arterioles are the main regulators.
Blood Volume: Directly influences pressure; dehydration lowers, while fluid retention raises.
Viscosity: Thicker blood (e.g., due to high red blood cell count) increases resistance.
Hormonal Regulation: Hormones like epinephrine, ADH, and aldosterone adjust blood pressure.
Lifestyle Factors: Stress, diet, exercise, and medications can all modify cardiovascular dynamics.
Conclusion
The cardiovascular system operates as an intricate network of the heart, vessels, and blood, maintaining homeostasis through tightly regulated processes. Understanding its anatomy, pressure dynamics, exchange mechanisms, and regulatory systems is crucial for appreciating how the body sustains life and responds to internal and external changes. Disruptions in any component can lead to significant health concerns such as hypertension, shock, or heart failure
Chapter 17: Mechanics of Breathing – Detailed Notes
🔹 Functions of the Respiratory System
Gas exchange: O₂ from atmosphere to blood; CO₂ from blood to atmosphere.
pH regulation: Controls CO₂ levels → affects H⁺ concentration (carbonic acid).
Protection: Filters and traps inhaled pathogens/particles.
Vocalization: Airflow through vocal cords allows speech.
🔹 Respiration Types
Cellular respiration: Intracellular reactions of O₂ with organic molecules to produce ATP.
External respiration: Movement of gases between environment and body.
🔹 Four Processes of External Respiration
Air exchange between atmosphere & lungs.
Gas exchange between alveoli & pulmonary capillaries.
Transport of O₂ and CO₂ in blood.
Exchange between blood & tissues.
🔹 Anatomy of the Respiratory System
Three Main Components
Conducting System: Airways → nose, pharynx, larynx, trachea, bronchi, bronchioles.
Gas Exchange Surface: Alveoli.
Thoracic Cage: Ribs, spine, diaphragm, intercostals, sternocleidomastoids, scalenes.
Upper vs. Lower Respiratory Tract
Upper: Nose, pharynx.
Lower: Larynx, trachea, bronchi, bronchioles, alveoli.
Airway Branching
Trachea → bronchi → bronchioles → terminal bronchioles → alveoli.
Trend: Decreasing diameter; increasing number and surface area.
🔹 Pleural Sacs & Fluid
Each lung is enclosed by a double-walled pleural sac.
Pleural fluid (25–30 mL) serves two key functions:
Lubrication (reduces friction).
Adheres lungs to thoracic wall via surface tension.
Membranes:
Visceral pleura: on lungs.
Parietal pleura: on thoracic wall.
🔹 Ciliated Epithelium & Mucociliary Escalator
Lining of trachea/bronchi contains cilia & mucus.
Traps and removes debris/pathogens.
CFTR mutation → Cystic Fibrosis: thick mucus, poor clearance.
🔹 Alveolar Structure
Alveoli: Air sacs at bronchiole ends; site of gas exchange.
Surrounded by capillaries (80–90% space).
Cell Types:
Type I cells: Thin, gas diffusion.
Type II cells: Produce surfactant (↓ surface tension).
No muscle tissue in alveoli → rely on elastic recoil (elastin/collagen).
🔹 Pulmonary Circulation
Right ventricle → pulmonary trunk → pulmonary arteries → lungs → pulmonary veins → left atrium.
Receives full cardiac output (5 L/min).
Low pressure system: 25/8 mmHg vs systemic 120/80 mmHg.
🔹 Gas Laws
Ideal Gas Law: PV = nRT → V ∝ 1/P
Boyle’s Law: P₁V₁ = P₂V₂
↓Volume → ↑Pressure.
Dalton’s Law: Total pressure = sum of partial pressures.
Dry air PO₂: 760 × 0.21 = 160 mmHg.
Humid air PO₂: (760 – 47) × 0.21 = 150 mmHg.
🔹 Ventilation Basics
Air flows high → low pressure (bulk flow).
Flow ∝ ΔP / R (resistance).
Two phases: Inspiration (active) and expiration (passive or active).
Changes in thoracic volume → pressure gradients.
🔹 Lung Volumes & Capacities
Lung Volumes:
Capacities:
Minute ventilation (VE): VT × RR = 500 mL × 12 = 6000 mL/min.Alveolar ventilation: (VT - Dead Space) × RR = (500 – 150) × 12 = 4200 mL/min.
🔹 Pressure Dynamics in Breathing
During Inspiration:
Thoracic volume ↑ → Palv ↓ (subatmospheric) → air flows in.
During Expiration:
Thoracic volume ↓ → Palv ↑ → air flows out.
Intrapleural Pressure (Pip):
Always negative at rest (≈ -3 mmHg).
Becomes more negative during inspiration (≈ -6 mmHg).
Pneumothorax:
Pleural seal broken → air enters → lung collapses.
🔹 Physical Properties of the Lungs
Lung Compliance (Stretchability):
High compliance: stretches easily.
Low compliance: requires more force.
ΔV/ΔP
Lung Elastance:
Tendency to return to original shape.
High compliance → low elastance.
🔹 Alveolar Surface Tension
Fluid lining alveoli creates surface tension → resists expansion.
Surfactant reduces this tension:
Secreted by Type II alveolar cells.
Composed of phospholipids & proteins.
Begins forming at 25 weeks; functional by ~34 weeks gestation.
NRDS (Newborn Respiratory Distress Syndrome):
Premature babies → low surfactant → alveolar collapse.
🔹 Airway Resistance
Resistance ∝ 1/r⁴ (Poiseuille's Law).
Trachea and bronchi: main resistance sites.
Bronchioles: subject to control via:
↑ CO₂ → bronchodilation.
Histamine/parasympathetic → bronchoconstriction.
Epinephrine (β₂ receptors) → bronchodilation.
🔹 Efficiency of Breathing
Total Pulmonary Ventilation (TPV): VE = RR × VT = 6000 mL/min.
Alveolar Ventilation: AV = RR × (VT – Dead Space) = 4200 mL/min.
Dead space = ~150 mL.
🔹 Alveolar Gases
Normal PO₂: 100 mmHg.
Normal PCO₂: 40 mmHg.
Hyperventilation:
↑ alveolar ventilation → ↑ PO₂, ↓ PCO₂ (< 40 mmHg).
Hypoventilation:
↓ alveolar ventilation → ↓ PO₂, ↑ PCO₂ (> 40 mmHg).
🔹 Lung Diseases
1. Obstructive Disorders
↑ Airway resistance, ↓ airflow.
E.g., asthma, emphysema, chronic bronchitis, sleep apnea.
↓ FEV1 and ↓ FEV1/FVC ratio.
2. Restrictive Disorders
↓ Lung compliance, ↓ lung volumes.
E.g., pulmonary fibrosis, NRDS.
↓ FEV1, but FEV1/FVC may be normal or ↑.
🔹 Pulmonary Function Testing
Forced Vital Capacity (FVC) Test: Total exhaled volume after full inspiration.
FEV1: Volume exhaled in the first second.
FEV1/FVC Ratio: Key in diagnosing lung diseases.
✅ Key Formulas Summary
Boyle’s Law: P₁V₁ = P₂V₂
Dalton’s Law: Pgas = Patm × %gas (dry); (Patm – PH₂O) × %gas (humid)
Minute Ventilation (VE): VT × RR
Alveolar Ventilation (VA): (VT – Dead Space) × RR
Compliance: ΔV / ΔP
Resistance: R ∝ 1/r⁴
🫁 Chapter 18: Gas Exchange & Transport — Detailed Notes
🔹 Factors That Affect Alveolar Gas Exchange
Gas exchange efficiency is influenced by:
Surface Area
Alveolar damage (e.g., emphysema) reduces surface area.
Diffusion Barrier Permeability
Thickened alveolar-capillary membrane (e.g., fibrosis) impairs diffusion.
Diffusion Distance
Edema increases distance → slower gas exchange.
Airway Resistance
Affects ventilation rate and volume.
🔹 Pathologies Causing Hypoxia
Hypoxia: Low oxygen in tissues.
Hypercapnia: Elevated CO₂ in blood.
Both can occur due to impaired ventilation, diffusion, perfusion, or blood transport.
🔹 Regulated Variables (To Maintain Homeostasis)
O₂ — for cellular metabolism.
CO₂ — affects pH, CNS function.
pH (H⁺ levels) — enzyme function and protein stability depend on it.
CO₂ + H₂O ⇌ H⁺ + HCO₃⁻
→ Increased CO₂ leads to acidosis (↓pH), a CNS depressant.
🔹 Partial Pressure Gradients Drive Diffusion
O₂ moves from alveoli to blood:
PO₂ (alveoli) = 100 mmHg
PO₂ (venous blood) < 40 mmHgCO₂ moves from blood to alveoli:
PCO₂ (venous blood) > 46 mmHg
PCO₂ (alveoli) = 40 mmHg
🧠 Reminder: Gases diffuse down their partial pressure gradients.
🩸 Gas Transport in the Blood
🔹 Oxygen (O₂) Transport
2 Forms in Blood:
Dissolved in plasma
~2% (because O₂ is poorly soluble in water).
Bound to hemoglobin (Hb)
~98% as oxyhemoglobin (HbO₂)
Reaction:
Hb + O₂ ⇌ HbO₂
🔹 Hemoglobin (Hb)
Found in RBCs
Made of:
4 globin chains
4 heme groups (each with an iron atom)
Iron binds to O₂ → reversible
Hemoglobin saturation:
% saturation = (O₂ bound / O₂ capacity) × 100
100%: all Hb binding sites occupied by O₂
🔹 Oxyhemoglobin Saturation Curve
Sigmoid shape due to cooperative binding.
At PO₂ = 100 mmHg (arterial): Hb ~98% saturated.
At PO₂ = 60 mmHg: Still ~90% saturated.
At PO₂ = 40 mmHg (tissues): ~75% saturated → 25% O₂ released.
🧠 Takeaway: Curve flattens at high PO₂ → protective O₂ reserve.
🎯 Factors that Influence Hb-O₂ Binding
🔹 ↓ Hb Affinity for O₂ (Right Shift of Curve)
Caused by:
↑ H⁺ (↓ pH) → Bohr Effect
↑ PCO₂
↑ Temperature
↑ 2,3-BPG (from glycolysis in RBCs)
→ Enhances O₂ unloading at tissues.
🔹 Bohr Effect
Lower pH = ↓ O₂ affinity
Example:
pH 7.4 → 75% saturation
pH 7.2 → 62% saturation
Hb releases 13% more O₂
🧠 This benefits metabolically active tissues (e.g. muscles)
🔹 2,3-Bisphosphoglycerate (2,3-BPG)
Produced during glycolysis.
↑ in chronic hypoxia (e.g., anemia, high altitude).
Binds Hb and ↓ affinity for O₂ → more O₂ released.
💨 Carbon Dioxide (CO₂) Transport
🔹 CO₂ Transported in 3 Ways
Reaction (in RBCs):
CO₂ + H₂O ⇌ H₂CO₃ ⇌ H⁺ + HCO₃⁻
Catalyzed by: carbonic anhydrase
🔹 Mechanism of CO₂ to HCO₃⁻ Conversion
CO₂ enters RBCs → converted to H₂CO₃ by carbonic anhydrase.
H₂CO₃ dissociates → H⁺ + HCO₃⁻.
HCO₃⁻ exits RBC into plasma via chloride shift (Cl⁻ enters RBC).
H⁺ buffered by Hb → prevents large pH drop.
🔹 At the Lungs
HCO₃⁻ re-enters RBC.
Reconverted to CO₂.
CO₂ diffuses into alveoli and is exhaled.
🧠 This reversible reaction is central to CO₂ removal and pH regulation.
🧠 Chapter Review Topics
✅ Key Concepts to Know
Three arterial blood parameters that regulate ventilation:
PO₂, PCO₂, and pH (H⁺)Partial pressures:
Gas exchange depends on:
Surface area, barrier thickness, permeability, diffusion gradient.Oxyhemoglobin saturation curve:
Sigmoidal shape due to cooperative binding.
Shifts with pH, temperature, CO₂, and 2,3-BPG.
Chemical reaction for CO₂ to HCO₃⁻:
CO₂ + H₂O ⇌ H₂CO₃ ⇌ H⁺ + HCO₃⁻
Catalyzed by: carbonic anhydraseCO₂ transport mapping:
Tissue → blood: CO₂ diffuses in, converted to HCO₃⁻.
Blood → lungs: HCO₃⁻ converted back to CO₂ → exhaled.
Chapter 19: The Kidneys (BIO 403 – Physiology I):
I. Functions of the Kidneys
Regulation of ECF volume & blood pressure – Controls blood volume, a determinant of pressure.
Regulation of osmolarity – Maintains fluid concentration (solute:solvent ratio).
Maintenance of ion balance – Especially Na⁺, K⁺, Ca²⁺, Cl⁻, HCO₃⁻.
Homeostatic regulation of pH – Manages H⁺ and HCO₃⁻ to stabilize blood pH.
Excretion of wastes – Both metabolic (e.g., urea, creatinine) and foreign (xenobiotics like drugs).
Production of hormones – Erythropoietin (RBC production), renin (BP regulation), calcitriol (vitamin D activation).
✅ Tremendous reserve capacity – function is maintained even if nephron number declines.
II. Components of the Urinary System
Kidneys: Filter blood and form urine.
Ureters: Transport urine to the bladder.
Urinary bladder: Stores urine until voiding.
Urethra: Conducts urine outside the body.
III. The Nephron – Functional Unit
~1 million per kidney
80% cortical nephrons: Located mostly in the renal cortex.
20% juxtamedullary nephrons: Dip into the medulla; key for urine concentration.
Nephron Components:
Vascular elements: Afferent arteriole → glomerulus → efferent arteriole → peritubular capillaries / vasa recta
Tubular elements:
Renal corpuscle (Bowman's capsule + glomerulus)
Proximal tubule
Loop of Henle
Distal tubule
Collecting duct
IV. Kidney Processes
Filtration – Blood to lumen (at renal corpuscle).
Reabsorption – Lumen to blood (peritubular capillaries).
Secretion – Blood to lumen (selective removal).
Excretion – Final removal of fluid as urine.
V. Filtration Details
180 L/day filtered; only 1.5 L/day excreted → 99% reabsorbed.
Filtration Fraction: % of plasma volume filtered; <1% excreted.
Filtration Barriers (3 Layers):
Capillary endothelium – Fenestrated, allows passage of most solutes.
Basement membrane – Acellular layer excludes large proteins.
Podocytes (epithelium of Bowman's capsule) – Foot processes form filtration slits.
Mesangial Cells: Support capillaries; can alter filtration by contracting.
VI. Pressures Affecting Filtration
Hydrostatic pressure (Pₕ): +55 mmHg, favors filtration.
Colloid osmotic pressure (π): -30 mmHg, opposes filtration.
Capsular fluid pressure (Pfluid): -15 mmHg, opposes filtration.
Net Filtration Pressure (NFP) = Pₕ - π - Pfluid = 10 mmHg
VII. Glomerular Filtration Rate (GFR)
Normal: 125 mL/min or 180 L/day
Filters plasma ~60x/day
↑ Afferent arteriole resistance → ↓ GFR
↑ Efferent arteriole resistance → ↑ GFR
VIII. GFR Regulation
Autoregulation
Maintains constant GFR (80–180 mmHg MAP)
Myogenic response: Vascular smooth muscle reacts to pressure changes.
Tubuloglomerular feedback: Macula densa senses flow; signals granular cells to adjust afferent arteriole tone.
Hormonal and Neural Regulation
Sympathetic activation: α-receptors → vasoconstriction → ↓ GFR
Angiotensin II: Potent vasoconstrictor → ↓ GFR
Prostaglandins: Vasodilators
IX. Reabsorption
Majority occurs in proximal tubule.
Active or passive via:
Transcellular transport: Through epithelial cells.
Paracellular transport: Between cells.
Reabsorptive Forces:
Peritubular capillary hydrostatic pressure (10 mmHg) < osmotic pressure (30 mmHg)
Net pressure = 20 mmHg → favors reabsorption
X. Secretion
Moves substances (e.g., H⁺, K⁺, drugs) from blood into nephron lumen.
Increases efficiency of excretion.
Active process.
XI. Excretion
Excretion = Filtration – Reabsorption + Secretion
Depends on:
GFR
Tubular handling (reabsorption/secretion)
Examples:
Glucose: fully reabsorbed (no excretion)
Urea: partially reabsorbed
Penicillin: secreted
XII. Renal Clearance
Clearance = rate at which plasma is cleared of a substance
Cₓ = (urine concentration × urine flow rate) / plasma concentration
Example: Inulin
Freely filtered, not secreted or reabsorbed → Clearance = GFR
Clinical Alternative: Creatinine
Used to estimate GFR (slight secretion)
Comparison Outcomes:
Clearance < GFR → Net reabsorption
Clearance > GFR → Net secretion
Clearance = GFR → Neither reabsorbed nor secreted
XIII. Micturition (Urination Reflex)
Urine path: Collecting ducts → renal pelvis → ureters → bladder → urethra
Control:
Internal sphincter: Smooth muscle, involuntary
External sphincter: Skeletal muscle, voluntary (CNS control)
Reflex Pathway:
Stretch receptors → spinal cord → parasympathetic output contracts bladder
Voluntary control via higher brain centers (inhibits/excites external sphincter)
XIV. Review Topics to Master
Kidney functions
Filtrate/urine pathway
Blood path in kidneys
Nephron structure
Filtration vs. reabsorption vs. secretion
Filtrate volume/osmolarity changes
Filtration barriers & control
GFR definition and regulation
Transport mechanisms
Tubular secretion importance
Clearance formula/application
Micturition reflex and control
Chapter 20: Fluid & Electrolyte Balance from your BIO 403 Physiology I course:
I. Overview: Fluid & Electrolyte Homeostasis
Kidneys are the main regulators of fluid and electrolyte balance.
Fluid/electrolyte balance is crucial for:
Na⁺: Controls ECF volume and osmolarity
K⁺: Affects membrane excitability
Ca²⁺: Needed for muscle contraction, exocytosis, neurotransmission
H⁺ / HCO₃⁻: Regulate blood pH
II. Water Balance
A 70 kg person is ~60% water.
Input = Output → Essential for homeostasis.
Water input: Food, drink, metabolism.
Water output: Urine (primary), feces, sweat, exhalation.
Kidneys and Water Loss
Can conserve or excrete water, but cannot restore lost volume.
Urine osmolarity reflects water handling:
↓ Osmolarity → dilute urine, excess water removed
↑ Osmolarity → concentrated urine, water conserved
Diuresis = production of dilute urine.
Water is reabsorbed in distal nephron via aquaporins (AQP).
III. Osmolarity Changes in the Nephron (Figure 20.4)
Fluid becomes more or less concentrated as it travels:
Proximal tubule: Isosmotic reabsorption
Loop of Henle: Filtrate becomes hyposmotic
Distal tubule / collecting duct: Variable osmolarity based on ADH
IV. Vasopressin (ADH – Antidiuretic Hormone)
Produced by the posterior pituitary.
Regulates water permeability in collecting ducts by controlling AQP2 channels.
When ADH is Present:
AQP2 inserted into apical membrane
Collecting duct becomes permeable to water
Water exits via osmosis → vasa recta
Urine becomes concentrated
When ADH is Absent:
No AQP2 on apical membrane
Water remains in tubule
Urine becomes dilute
AQP2 Locations:
Apical membrane (when ADH is active)
Storage vesicles in cytoplasm
V. Regulation of ADH Secretion
Stimuli for ADH release:
↑ Plasma osmolarity (most sensitive; threshold: 280 mOsM)
↓ Blood volume
↓ Blood pressure
Osmoreceptors in hypothalamus detect osmolarity.
ADH secretion follows a circadian rhythm (increased at night).
VI. Sodium Balance
NaCl intake → ↑ ECF osmolarity → triggers:
Thirst → ↑ Water intake
Vasopressin release → Water reabsorption
Na⁺ excretion is regulated at the distal tubule and collecting duct.
VII. Aldosterone
Steroid hormone made in adrenal cortex.
Increases Na⁺ reabsorption and K⁺ secretion.
Primary site of action: Last third of distal tubule & cortical collecting duct.
Target cells: Principal cells (P cells).
VIII. Renin-Angiotensin-Aldosterone System (RAAS)
Triggered by ↓ blood pressure
Renin (from JG cells) → cleaves angiotensinogen → ANG I
ACE converts ANG I → ANG II
ANG II Functions:
Stimulates aldosterone release
Increases vasopressin secretion
Stimulates thirst
Acts as a vasoconstrictor
Increases Na⁺ reabsorption in proximal tubule
Enhances sympathetic output
ACE inhibitors are used clinically to lower BP by interrupting RAAS.
IX. Natriuretic Peptides
Atrial Natriuretic Peptide (ANP)
Made in atrial myocardial cells
Released in response to increased blood volume (atrial stretch)
Actions:
↑ GFR (by dilating afferent arteriole)
↓ Na⁺ reabsorption
Suppresses renin, aldosterone, and vasopressin
Promotes natriuresis and diuresis → ↓ BP
Brain Natriuretic Peptide (BNP)
Released by ventricular cells and some neurons
Similar role to ANP
X. Potassium Balance
Plasma K⁺ levels must be tightly regulated
Aldosterone promotes K⁺ secretion
Disorders:
Hypokalemia (low K⁺): Muscle weakness, possible heart failure
Hyperkalemia (high K⁺): Cardiac arrhythmias, potentially fatal
Causes: Kidney disease, diarrhea, certain diuretics
XI. Chapter Review Topics
Reflex pathway of vasopressin action
Vasopressin’s cellular mechanism at principal cells
Homeostatic responses to salt intake
Aldosterone action on principal cells
RAAS pathway & ANG II effects
Natriuretic peptide release & effects
Behavioral mechanisms (thirst, salt appetite)
K⁺ regulation importance and mechanisms
Compensatory mechanisms for:
Volume loss/gain
Osmolarity disturbances