Chapter 18

Concept 18.1: Environment influences bacteria transcription

  • Natural selection favors Conservation of energy and resources in bacteria.

  • Cell regulates activity of enzymes by feedback inhibition or by gene regulation.

    • Feedback inhibition: end product of metabolic pathway shuts down further synthesis.

    • Gene regulation: enzyme production is controlled/regulated.

  • By default, the trp operon is on and tryptophan ammino acid is made.

  • When tryptophan is preset, it binds to trp repressor protein which stops production of AA (since its not needed) by turning on repressor.

  • Repressor is in active state only in presence of its corepressor tryptophan.

  • Thus trp operon is repressed or stopped from producing.

Repressible and Inducible Operons: Two types of Negative Gene Regulation

  • A repressible operon is one that is usually on but binding of a repressor to a operator turns it off.

    • Trp is an repressible operon.

  • Inducible operon is one that is usually off until an inducer activates the repressor which turns on operon.

    • Lac repressor/operon is an inducible operon that is activated by the presence of lactose, allowing transcription of genes required for lactose metabolism.

  • Inducible Operons usually only function in catabolic pathways - always activated by a chemical signal.

  • Repressible enzymes usually only function in anabolic pathways, being repressed by high concentration of end product.

  • Regulation of trp and lac are negative gene regulation , where the binding of a repressor protein to the operator sequence inhibits transcription.

Positive Gene Regulation

  • Some operons are also subject to positive control through a stimulatory protein, such as cyclic AMP receptor protein (CRP).

  • When glucose is scarce, CRP is activated by binding w/ cyclic AMP (cAMP).

    • Low-food → Low Glucose → CRP + cAMP → operon activation → production of glucose

  • Activated CRP attaches to the promoter of lac operon and increases the affinity of RNA polymerase.

    • Jumpstarts transcription… more glucose.

    • trp and lac are a focus, CRP is priority 2.

18.2: Eukaryotic Gene expression is regulated at many stages.

  • All organisms must regulate which genes are expressed at any given time.

  • Genes are turned on and off in response to signals… internal & external cues.

  • Multicellular organisms, regulation of gene expression is essential for cell specialization… cells → tissues → organs → organ systems.

Different Gene Expression

  • Almost all the cells in an organism contain an identical genome.

  • Differences between cell types result from differential gene expression.

  • Abnormalities in gene expression can lead to diseases like caner.

  • Gene expression is regulated at MANY stages.. but happens most often @ transcription.

Histone Modifications and DNA Methylation

  • Heterochromatin - non expressed, packed.

  • Euchromatin - less packed.

  • Histone acetylation opens up and prevents packing