LECTURE-1 2021 BIOL 151 CELL STRUCTURE PDF

Page 1: Course Information

  • Course: BIOL 151 Cell Structure

  • Examiner: Professor William Gariba Akanwariwiak, Biological Sciences

  • Date: 18/01/2021

Page 2: COVID-19 Awareness

  • Cause: COVID-19 is caused by the SARS-CoV-2 virus.

  • Transmission: Spreads via respiratory droplets, airborne transmission, and contaminated surfaces.

  • Symptoms Include: Fever, cough, difficulty breathing, chills, cold, headache, diarrhea, loss of taste or smell, and other non-specific symptoms.

Page 3: COVID-19 Safety Protocols

  • Prevention Measures:

    • Respiratory Hygiene: Use of masks and proper cough etiquette.

    • Hand Hygiene: Regular handwashing and sanitizing.

    • Physical Distancing: Maintain safe distance in public.

    • Environmental Awareness: Avoid crowded and poorly ventilated spaces.

    • Note: Adhering to protocols is essential due to the virus's mutating nature.

Page 4: Attendance Policies

  • Attendance Requirement: Integral part of course assessment.

  • Incentives: 10% marks awarded for 100% attendance.

Page 5: Attendance Consequences

  • Cumulative Absences: Exceeding three absences before mid-semester leads to ineligibility for mid-semester and end-exams.

Page 6: Attendance Exceptions

  • Students with acceptable excuses (approved by lecturer) will not receive automatic zero but deferred scores (Df).

Page 7: Assessment Overview

  • Pass Mark: 40%.

  • Weightage: Mid-Semester Exam (30%), End of Semester Exam (70%).

  • Format: Mid-Semester examination consists of fill-in-the-blank questions, scheduled from March 1 to March 5, 2021.

Page 8: Examination Duration

  • Timing: Each exam will last for one hour.

  • Topics Included: Examinations questions will cover material from January 18/19/21 to February 22/23/25.

Page 9: End of Semester Examination

  • Schedule: April 12 to April 23, 2021.

  • Format: 100 or 120 multiple choice questions.

  • Duration: Two hours.

Page 10: Breakdown of Course Assessment

  • Components:

    • Knowledge (C1)

    • Comprehension (C2)

    • Application (C3)

    • Analysis (C4)

    • Synthesis (C5)

    • Evaluation (C6)

Page 11: Participation & Assignment Weightage

  • Components:

    • Attendance and Participation: 10%

    • Assignment/Presentation/Term Paper: 5%

    • Practicals/Labs: 5%

    • Mid-Semester Examination: 20%

    • Final Examination: 70%

Page 12: Grading Scale

  • Grades:

    • A: 70-100 (Excellent)

    • B: 60-69 (Very Good)

    • C: 50-59 (Good)

    • D: 40-49 (Pass)

    • F: 0-39 (Fail)

    • I: Incomplete

Page 13: Degree Classification

  • Classifications:

    • 1st Class: 70.00 – 100.00

    • 2nd Class Upper: 60.00 – 69.99

    • 2nd Class Lower: 50.00 – 59.99

    • Pass: 45.00 – 49.99

Page 14-15: Employability Skills

  • Desired Skills:

    1. Communication and Interpersonal Skills

    2. Problem-Solving Skills

    3. Initiative

    4. Working Under Pressure

    5. Organizational Skills

    6. Teamwork

    7. Adaptability

    8. Numeracy

    9. Valuing Diversity

    10. Critical Thinking

Page 16-20: Recommended Reading

  • Main Texts:

    • Principles and Techniques of Practical Biochemistry by Keith Wilson and John Walker.

    • Techniques Used in Bioproduct Analysis by Butterworth-Heinemann Ltd.

    • Structure and Function of Cells by Colin R. Hopkins.

  • Additional references for further reading in Molecular Cell Biochemistry, Microbiology, and Cell Biology.

Page 21-24: Broad Course Objectives

  • Course Goals:

    • Understand the theory and usage of light and electron microscopes.

    • Discriminate cellular structures.

    • Master cell and tissue fractionation methods.

Page 25-27: Specific Course Objectives on Microscopy

  • Skills Development:

    • Understanding the capabilities and limitations of simple microscopes.

    • Defining and calculating magnification, resolution, and identifying microscopy techniques.

Page 28-29: Units of Measurement in Microscopy

  • Unit Conversions:

    • 1000 micrometers (µm) = 1 millimeter (mm).

    • 1000 nanometers (nm) = 1 micrometer (µm).

Page 30: Microscope Functionality

  • Role of microscopes in determining cellular structures at the molecular level.

  • Contrast work against the transparency of specimens.

Page 31-39: Types and Defects of Simple Microscopes

  • Simple Microscopes: Uses one lens for magnification compared to compound microscopes.

  • Common Issues: Spherical aberration affecting clarity and resolution.

Page 40-44: Correcting Aberration Issues

  • Solutions for Aberrations:

    • Specialized lens designs.

    • Using immersion mediums to reduce refraction.

Page 46-50: Chromatic Aberration

  • Definition: Optical problem resulting in color fringing where light of different wavelengths refracts differently.

  • Solutions: Acromatic doublets using flint and crown glass.

Page 51-52: Light Microscopy Basics

  • Light Microscopy: Methods to observe specimens using visible light.

  • Basic types: Compound and Dissecting Microscopes.

Page 53-56: Functions of Light Microscopes

  • Key Functions: Magnification and enhancing resolution.

  • Max resolution range for microscopes and specifics about types.

Page 57-68: Resolution of Light Microscopes

  • Key Factors: Numerical aperture, wavelength of light, and principles affecting resolution and clarity.

Page 69-100: Advanced Microscopy Techniques

  • Highlights: Discussion of bright-field, phase-contrast, darkfield, ultraviolent, and fluorescence microscopy, exploring their unique functionalities and applications.

Page 101-206: Cell Structure and Organelles

  • Components of Cells:

    • Main organelles, their structure, function, and how they contribute to cellular activities.

Page 207-275: Cytoskeleton Structure & Function

  • Cytoskeleton Overview: Explanation of microtubules, microfilaments, and their roles in cell shape, movement, and division.

Page 276-306: Cell Fractionation Techniques

  • Discussion of methods for separating cellular components, emphasizing differential and buoyant density centrifugation.

Page 307-350: Chromatography Techniques

  • Various modes of chromatography for separating chemical compositions, focusing on the practical applications in lab analysis.