Taxonomy and Classification Notes

Taxonomy and Binomial Nomenclature

  • Taxonomy:
    • The science of classifying organisms based on relationships and common structures.
  • Binomial Nomenclature:
    • A two-name system for all living things.

Why Classify Living Things?

  • An estimated 8.8 million different species exist, but only 1.9 million have been described.
  • Classification helps organize organisms according to similarities.
  • Understanding biological diversity is crucial before studying population evolution.
  • Two Kinds of Biological Diversity:
    • Species diversity: the number of different species.
    • Genetic diversity: the variation in inherited traits within a species.

Carl Linnaeus and Taxonomy

  • Carl Linnaeus developed a two-naming system based on physical and structural features of organisms.
  • Published in "Species Plantarum" (1753).
  • The more features organisms share, the closer their relationship.

Linnaeus's Order of Classification

  • Hierarchical structure:
    • Kingdom
    • Phylum
    • Class
    • Order
    • Family
    • Genus
    • Species
  • Mnemonic: Kids Play Catch Over Farmer Green's Stables

Binomial Nomenclature Details

  • Linnaeus established rules for naming plants and animals using a two-word system (Latin words).
  • Scientific names are based on characteristics like color or habitat.
    • Example: Castor canadensis
      • Castor means beaver.
      • canadensis means from Canada.

Scientific Name Rules

  • First word = Genus:
    • Always CAPITALIZED.
  • Second word = species:
    • Not capitalized.
    • Never stands alone (needs the Genus).
  • Both Genus and species words are either Underlined or Italicized.
  • Examples:
    • Felis domesticus or Canus familiarius
    • Felis leo, Felis concolor; Canus latrans, Canus lupus

Scientific Names: Relationships

  • Scientific names indicate if two organisms are closely related.
    • North American black bear: Ursus americanus
    • Grizzly Bear: Ursus horribilis
    • Polar Bear: Ursus maritimus
  • All belong to the same genus (Ursus) indicating a close relationship.

Species Relationships

  • Bears (Family - Ursidae) belong to the order Carnivora.
  • Closest relatives in the same order:
    • Family - Canidae (dog family)
    • Family - Mustelidae (weasel family)
    • Family - Procyonidae (raccoon family)
    • Family - Phocidae (true seal family)
    • Family - Otariidae (eared seal family).
  • Seals & sealions are believed to be the closest relatives of bears.

Examples of Classification

  • Specific examples of common names, scientific names, and family:
    • Red squirrel (Tamiasciurus hudsonicus, Sciuridae)
    • Shorttail weasel (Mustela erminea, Mustelidae)
    • Groundhog (Marmota monax, Sciuridae)
    • Mink (Mustela vison, Mustelidae)
    • Eastern chipmunk (Tamias striatus, Sciuridae)
    • River otter (Lutra canadensis, Mustelidae)
    • Fisher (Martes pennanti, Mustelidae)
    • Muskrat (Ondatra zibethica, Cricetidae)
    • Black-footed ferret (Mustela nigripes, Mustelidae)

The Six Kingdoms

  • Linnaeus proposed a 2 Kingdom System:
    • Kingdom Plantae & Kingdom Animalia
  • Later discovery of single-celled organisms led to:
    • Kingdom Protista
  • Recognition that some single-celled organisms lacked a true nucleus:
    • Kingdom Monera
  • Monera subdivided into:
    • Kingdom Archaebacteria
      • Bacteria in harsh environments (hot springs, salty & acidic).
    • Kingdom Eubacteria
      • Possess a rigid cell wall.

Approaches to Classifying Organisms

  • Two-kingdom system (Linnaeus - 1735):
    • Plantae, Animalia
  • Five-kingdom system (Whittaker - 1969):
    • Monera, Protista, Fungi, Plantae, Animalia
  • Six-kingdom system (Woese - 1977):
    • Eubacteria, Archaebacteria, Protista, Fungi, Plantae, Animalia
  • Three-domain system (Woese - 1990):
    • Bacteria, Archaea, Eukarya

Kingdoms and Associated Groups

  • Illustrative examples of organisms within each kingdom.
    • Kingdom Plantae:
      • angiosperms, pteridophyta, gymnosperms, tracheophytes, bryophyta, rhodophyta, phaeophyta, chlorophyta
    • Kingdom Animalia:
      • echinodermata, annelida, arthropoda, mollusca, chordata, nematoda, cnidaria, rotifera, platyhelminthes, porifera
    • Kingdom Fungi:
      • basidiomycetes, ascomycetes, zygomycetes, gymnomycota
    • Kingdom Protista:
      • chrysophyta, sarcodina, pyrrophyta, ciliophora, sporozoa, mastigophora
    • Kingdom Eubacteria:
      • bacteria, cyanobacteria
    • Kingdom Archaebacteria:
      • extreme halophiles, methanogens, extreme thermophiles

Phylogeny

  • Phylogeny: The history of the evolution of organisms.
  • Phylogenetic tree:
    • Starts from the most ancestral form.
    • Includes branching of all its descendants.

Classification Examples

  • Classification breakdown from species to order:
    • Felis catus (domestic cat)
      • Genus: Felis
      • Family: Felidae
      • Order: Carnivora (Feloidea)
    • Mephitis mephitis (striped skunk)
      • Genus: Mephitis
      • Family: Mustelidae
      • Order: Carnivora (Canoidea)
    • Lutra lutra (European otter)
      • Genus: Lutra
      • Family: Mustelidae
      • Order: Carnivora(Canoidea)
    • Canis familiaris (domestic dog)
    • Canis lupus (wolf)
      • Genus: Canis
      • Family: Canidae
      • Order: Carnivora (Canoidea)

Dichotomous Key

  • Dichotomous Key:
    • Used to help identify an organism.
    • Involves a series of choices that lead to further choices.
    • Continues until the organism can be identified.
  • Activity: Dichotomous key activity to identify creatures (complete first 5).
  • Tomorrow: Activity on Insects

Kingdom of Pasta – Naming Game

  1. Sort individuals into THREE related groups.
    • These 3 groups may be members of the same Genus.
  2. Give the individual pastas a scientific name (Genus species).
    • Try to make the names descriptive & Latin sounding. (USE GOOGLE TRANSLATE English – Latin)
  3. Genus species names are always italicized.
    • Genus is CAPITALIZED & species name is lower case.
  4. For each of the 3 groups describe the commonalities each pasta shares.
  5. Submit your names & classification descriptions by table.