Laboratory Procedure and Pipetting Instructions
General Instructions
- Participants should pick up the tubes, strap them, and place them in the provided black rack. Each participant will have their own black rack.
- A total of four tubes should be placed in the rack.
Labeling Tubes
- Each tube should be labeled on the frosted section using initials for easy identification.
- It is important to ensure that tubes are capped properly before proceeding to the next steps.
Safety Precautions
- Goggles are required when starting the process involving projectiles or pipette headers.
- Participants must wear their goggles before moving on to the next steps.
Pipetting Instructions
Initial Equipment
- The pipette to be used for the next step is the p 1,000, which should read 090 on the display, indicating it can handle 900 microliters (0.9 mL).
Using the Pipette
- Familiarize yourself with how to use the pipette:
- Soft Stop: Press down until you feel resistance (first stop).
- Hard Stop: Push all the way down to release liquid.
- Steps to pipette:
- Dip the tip into the water (do not push it all the way down).
- Release the plunger to fill the pipette tip with 900 microliters of water.
- Withdraw the pipette and dispense the water into tube number one.
- Repeat the process for all four tubes, aiming for consistent volume among all tubes.
- If the tip touches anything outside of the liquid, it is necessary to change the tip to prevent cross-contamination.
- Ensure that all tubes have approximately the same volume of water.
Final Checks on Tubes
- After filling, verify the volumes in the tubes before proceeding:
- Ensure all tubes have the same amount of liquid (indicated by a mark on the tube indicating the desired level).
- Check for air bubbles that may be affecting the volume and adjust as necessary.
Weighing Soil
Equipment Usage
- Each pair will have access to a digital scale which should be turned on for weighing.
- Participants must place their weigh boat on the scale carefully, ensuring fingers do not touch the inside of the weigh boat to maintain accuracy.
- Important to press the tare button to reset the scale to zero before weighing.
Filling the Weigh Boat
- Use the spatula provided to fill the weigh boat with soil:
- Aim for approximately 1.0 gram of soil.
- The precision of weighing can vary based on the type of soil.
- If too much soil is added, adjust by scraping some away without touching the weigh boat with fingers.
- Acceptable variation is when the scale fluctuates between values close to 1.0 gram.
Mixing Soil and Water
Vortexing Process
- After all soils have been measured:
- Each participant will use a vortex mixer to combine water and soil.
- Hold the vial securely, ensure the cap is tight, and vortex for 5-10 seconds to mix well.
- Expect the resultant mixture to contain microbes and be evenly blended.
Serial Dilution Process
- Pipetting Tips: The pipetting will switch to using blue-bottomed pipette tips. Ensure unused tips and pipettes are stored properly with lids closed.
- Prepare to transfer only from the second, third, and fourth tubes to new plates:
- Allocate 100 microliters from each tube to the designated plates (plate 2, plate 3, and plate 4).
- Use the same pipetting technique:
- Soft stop to fill the pipette tip with liquid.
- Inserting the tip into the new location (e.g., nutrient agar on the plates).
- Use a cell spreader to evenly distribute the liquid on the plate surface.
- Ensure to use a new tip for each transfer to prevent contamination.
Labeling Plates
- It is critically important to label all plates clearly:
- Initials and the date must be included (e.g., “Initials – 10th February”).
- Clearly label positions: e.g., Plate 2, Plate 3, Plate 4 based on the tube sources they originated from.
- After pipetting, ensure all waste and materials are disposed of properly and station cleanup is done after the experiments.
- Finally, return the pipettes and tips to their original locations as specified.