biochemistry

Atomic structure and ions

  • Atoms consist of a nucleus (protons and neutrons) with electrons surrounding it.
  • Ions are atoms with a net electrical charge; in solution, common example from salts: Na+Na^{+} and ClCl^{-}.
  • Hydrogen ion is H+H^{+}; acids increase [H+][H^{+}] in solution.

Chemical bonds

  • Ionic bond: electrostatic attraction between oppositely charged ions (often from electron transfer).
  • Covalent bond: sharing of electrons between atoms.
  • Nonpolar covalent bond: equal sharing of electrons (e.g., H2H_{2}).
  • Polar covalent bond: unequal sharing leading to partial charges.

Water properties and phase changes

  • Water requires energy to change phase: ice -> liquid, liquid -> steam.
  • Water as solvent: solvent is H2OH_{2}O; solute (e.g., sugar) dissolves to form a solution.
  • Solution: homogeneous mixture of solute and solvent.
  • Cohesion: water molecules stick to each other.
  • Adhesion: water sticks to surfaces (e.g., skin);
  • Surface tension: water has high surface tension, can act like a skin on its surface.
  • Capillary action: water moves through narrow spaces (e.g., in wood) due to cohesive and adhesive forces.
  • Density: ice is less dense than liquid water; ice floats on water.

Dissolution terminology

  • Solvent: the substance doing the dissolving (water, in most biological contexts).
  • Solute: the substance being dissolved (e.g., sugar).
  • Solution: dissolved homogeneous mixture of solute in solvent.

pH and hydrogen ions

  • Increase in H+H^{+} ions indicates higher acidity (lower pH).
  • H+H^{+} represents a positively charged hydrogen ion; neutral diatomic hydrogen H2H_{2} has no charge.

Health and salts (brief note from transcript)

  • High salt intake is associated with hypertension; reducing salt can help manage blood pressure.