Cells: The Working Units of Life - Study Notes

Cells: The Working Units of Life

Part 1

Learning Objectives
  • Understanding the fundamental features that make cells the fundamental units of life.
  • Exploration of prokaryotic cells characteristics.
  • Exploration of eukaryotic cells characteristics.
  • Examination of the roles of extracellular structures.
  • Understanding the origin of eukaryotic cells.

Vocabulary
  • Cell Membrane
  • Cell Theory
  • Cytoplasm
  • Cytosol
  • Eukaryotes
  • Nucleus
  • Organelles
  • Prokaryotes
  • Surface Area-to-Volume Ratio
  • Cell Wall
  • Cytoskeleton
  • Flagella
  • Internal Membrane
  • Vesicle
  • Nucleoid
  • Outer Membrane
  • Pili
  • Ribosomes
  • Autophagy
  • Cellular Respiration
  • Chloroplasts
  • Chromatin
  • Chromosomes
  • Cilia
  • Endomembrane System
  • Endoplasmic Reticulum (ER)
  • Exocytosis
  • Plasma Membrane
  • Glyoxysomes
  • Golgi Apparatus
  • Intermediate Filaments
  • Mitochondria
  • Nuclear Envelope
  • Nucleolus
  • Peroxisomes
  • Phagocytosis
  • Plastids
  • Rough Endoplasmic Reticulum (RER)
  • Secondary Lysosome
  • Smooth Endoplasmic Reticulum (SER)
  • Vacuoles

What Features Make Cells the Fundamental Units of Life?
  • Cell Theory is a unifying theory in biology that states:
    • Cells are the fundamental units of life.
    • All organisms are composed of cells.
    • All cells arise from preexisting cells.
    • Quote by E.B. Wilson:
    • “Long ago it became evident that the key to every biological problem must finally be sought in the cell; for every living organism is, or at some time has been, a cell.”
Implications of the Cell Theory
  • Functions of all cells are similar but not identical, allowing for specialization (e.g., cardiomyocytes vs. pyramidal cells).

Size of Cells
  • Cells are generally small, with most cells ranging from 10-20 μm in size.
  • The largest human cell is the egg (oocyte), measuring approximately 150 μm in diameter, making it barely visible to the naked eye.
  • Comparative sizes of various specimens:
    • Oscillatoria: 7,000 μm
    • E. coli: 1,300 x 4,000 μm
    • Rickettsia: 475 μm
    • Poxvirus: 230 x 320 μm
    • Influenza virus: 85 μm
    • T2 E. coli bacteriophage: 65 x 95 μm
    • Tobacco mosaic virus: 15 x 300 μm
    • Poliomyelitis virus: 27 μm
Why Are Cells Small?
  • Cells maintain a high surface area-to-volume ratio crucial for efficiency:
    • Volume determines the amount of chemical reactions per unit time; larger cells have more metabolic activity.
    • Surface area determines the rate at which resources enter and waste exits the cell.
  • There are advantages to being small which aid in these processes.

Mathematical Representation of Cell Size

1 μm = 1 x (ext106)( ext{10}^{-6}) m

  • Surface area of a sphere: A=4extπr2A = 4 ext{π}r^2
  • Volume of a sphere: V=43πr3V = \frac{4}{3}\text{π}r^3
  • Example data for cell diameter, surface area, and volume implications on ratios:
    • Diameter 1 μm:
    • Surface Area = 4π ≈ 3.14 μm²
    • Volume = 0.52 μm³
    • Ratio (S/V) = 6:1
    • Diameter 2 μm:
    • Surface Area = 12.56 μm²
    • Volume = 4.19 μm³
    • Ratio (S/V) = 3:1
    • Diameter 3 μm:
    • Surface Area = 28.26 μm²
    • Volume = 14.18 μm³
    • Ratio (S/V) = 2:1

Microscopy and Cell Observation
  • Most cells require a microscope for visibility.
    • Maginification: Increase size appearance.
    • Resolution: Defines clarity, or the minimum distance at which two points can be distinguished as separate.
    • Low resolution examples vs high resolution examples.
  • Scale of Life:
    • Example sizes from atoms to organisms:
    • Atoms: 0.1 nm
    • Small molecules: 1 nm
    • Most bacteria: 1 μm
    • Most plant and animal cells observed under light microscope.

Types of Microscopes
  • Light Microscopes:
    • Use glass lenses and visible light.
    • Maximum resolution of 0.2 μm.
  • Electron Microscopes:
    • Use electromagnets to focus electron beams.
    • Maximum resolution of 0.2 nm.

Looking at Cells
  • Light Microscopes:
    • Bright-field, phase-contrast, fluorescence microscopy options with various magnification standards.
  • Scanning Electron Microscope (SEM):
    • Provides 3D images of surfaces (e.g., ant's head, eye).

The Plasma Membrane
  • Definition: The plasma membrane serves as the outer boundary of the cell.
  • Composition:
    • Made up of a phospholipid bilayer embedded with proteins and carbohydrates.
  • Functions:
    • Selectively permeable barrier.
    • Maintains constant internal environment (homeostasis).
    • Involved in communication and signaling.
    • Facilitates adhesion between adjacent cells.
Structure Details
  • Phospholipid Bilayer:
    • Composed of hydrophilic heads facing the aqueous environment and hydrophobic tails facing inward.
  • Embedded Proteins:
    • Include receptors, transport proteins, adhesion proteins, etc.

Extracellular Matrix
  • Complex network consisting of proteins like collagen embedded within proteoglycan complexes.
  • Fibronectin: Attaches the ECM to integrins which are embedded proteins that link the external environment to internal filaments and can transmit signals impacting cell behavior.

Microscopy of the Plasma Membrane
  • Early beliefs about a "bald" cellular surface were corrected by findings of the varying complexity in the components.

Prokaryotic vs. Eukaryotic Cells
  • Prokaryotic Cells:
    • Lack a nucleus and membrane-bound organelles.
    • Exhibit simpler structure.
    • Characteristics:
    • Typically 1-10 micrometers in diameter.
    • Contain a plasma membrane enclosing the cell.
    • DNA is located in a nucleoid region and not inside a nucleus.
    • Cytoplasm includes cytosol plus ribosomes and other structures.
  • Eukaryotic Cells:
    • Contain a nucleus and membrane-bound organelles.
    • Exhibit more complexity.
    • Characteristics:
    • Usually 10-100 micrometers in diameter.
    • Organelles perform specialized functions that contribute to cellular operations.
    • Examples include the nucleus, chloroplasts, and mitochondria.
Major Differences Between Prokaryotic and Eukaryotic Cells
  • Cell Structure:
    • Prokaryotes: No nucleus, single circular DNA, smaller ribosomes, and simpler cytoskeleton.
    • Eukaryotes: Defined nucleus, multiple linear chromosomes, larger ribosomes, and complex cytoskeleton.
  • Cell Division:
    • Prokaryotes: Binary fission.
    • Eukaryotes: Mitosis.

Characteristics of Prokaryotic Cells
  • Enclosed by a plasma membrane.
  • Cytoplasm: Composed of cytosol, ribosomes, and filaments.
  • Rigidity provided by a cell wall (usually).
  • Movement facilitated by flagella in some bacteria.
  • Pili: Hair-like structures that aid in adherence to surfaces and can facilitate genetic exchange.
  • Fimbriae: Shorter than pili, also help in adherence.
Cytoskeleton Functionality in Prokaryotes
  • A system of protein filaments maintaining cell structure and assisting in cell division, although simpler than in eukaryotic cells.

Characteristics of Eukaryotic Cells
  • Formed with multiple organelles, allowing for larger size and multiple cellular functions.
  • Organelles include the nucleus, endoplasmic reticulum, mitochondria, and more, each serving specialized roles in cellular metabolism and processes.

The Nucleus
  • Largest organelle within eukaryotic cells, holds genetic material (DNA) with sites for replication and transcription processes.
  • Surrounded by the nuclear envelope with nuclear pores for molecule transport.
Chromatin and Chromosomes
  • DNA in the nucleus is associated with proteins forming chromatin.
  • Condensed chromatin forms chromosomes during cell division.
Nucleolus
  • Dense region within the nucleus, site for ribosome assembly, which are then exported to the cytoplasm.