BIOCHEM CH10

Biochemistry II - Lecture 10 Notes

Mobilization of Triacylglycerols

  • Stored in Adipose Tissue

    • Glucagon: Hormone that stimulates the mobilization of triacylglycerols from adipose tissues.

    • Key Components:

    • Adenylyl cyclase: Enzyme that converts ATP to cAMP when activated.

    • Receptor: Interacts with glucagon and activates the Gs protein.

    • Gs Protein: Stimulatory G protein that activates adenylyl cyclase.

    • ATP, cAMP: Energy currency and secondary messenger, respectively.

    • CGI-58: Comparative Gene Identification 58, activates ATGL.

    • ATGL: Triacylglycerol lipase that hydrolyzes triacylglycerol to diacylglycerol.

    • Lipid droplet: Store of fats within adipocytes (fat cells).

    • Monoacylglycerol: Product of diacylglycerol hydrolysis.

    • Perilipin: Structural protein associated with lipid droplets, serves as a barrier to lipolysis.

    • HSL (Hormone-sensitive lipase): Further hydrolyzes diacylglycerol into monoacylglycerol and releases free fatty acids and glycerol.

    • Glycerol: Released into the bloodstream; can enter the glycolytic pathway.

    • MGL (Monoacylglycerol lipase): Hydrolyzes monoacylglycerol to glycerol and free fatty acids.

    • Fatty acid transporter: Transports fatty acids into cells, especially into myocytes (muscle cells).

Entry of Glycerol into the Glycolytic Pathway

  • Energy Content: Most biological energy in triacylglycerols resides in their three long-chain fatty acids.

  • Glycerol kinase: Converts glycerol into glycerol 3-phosphate via phosphorylation.

  • Glyceraldehyde 3-phosphate: Can enter the glycolysis pathway following conversion from glycerol.

Fatty Acids Activation and Transport into Mitochondria

  • Small Fatty Acids: Fatty acids with fewer than 12 carbons diffuse freely across mitochondrial membranes.

  • Carnitine Shuttle: Mechanism transporting long-chain fatty acids (≥14 carbons) across mitochondrial membranes, requires conversion to fatty acyl-CoA and attachment to carnitine.

Fatty Acyl-CoA Synthetase

  • Function: Activates fatty acids by converting them to fatty acyl-CoA thioesters.

    • Reaction:
      ext{fatty acid} + ext{CoA} + ext{ATP}
      ightleftharpoons ext{fatty acyl-CoA} + ext{AMP} + ext{PPi}

Formation of a Fatty Acyl-CoA

  • Structure: Contains a high-energy thioester linkage between the fatty acid carboxyl group and the thiol group of coenzyme A.

Overall Reaction for Fatty Acyl-CoA Formation

  • Steps:

    • Two-step formation of the fatty acyl-CoA derivative.

    • Hydrolysis of created pyrophosphate.

  • Overall reaction:
    ext{fatty acid} + ext{CoA} + ext{ATP}
    ightleftharpoons ext{fatty acyl-CoA} + ext{AMP} + 2 ext{Pi}
    ext{ΔG'}^ ext{°} = -34 ext{ kJ/mol}

Carnitine

  • Role: Transports fatty acyl-CoAs into mitochondria for oxidation.

  • Chemical Structure:
    ext{CH}3- ext{[N(CH}2 ext{)}_3]- ext{COO}^-

Carnitine Acyltransferase 1 (CAT1)

  • Function: Catalyzes the attachment of carnitine to fatty acyl-CoA, forming fatty acyl-carnitine.

    • Reaction: Transesterification reaction.

Acyl-Carnitine/Carnitine Cotransporter

  • Function: Passively transports fatty acyl-carnitine into the mitochondrial matrix while moving carnitine into the intermembrane space.

Carnitine Acyltransferase 2 (CAT2)

  • Function: Transfers fatty acyl group back to CoA from carnitine to regenerate fatty acyl-CoA and free carnitine.

  • Location: Inner mitochondrial membrane.

Two Pools of Coenzyme A

  • Cytosolic Pool: Used for the biosynthesis of fatty acids.

  • Mitochondrial Pool: Used in oxidative degradation of pyruvate, fatty acids, and some amino acids.

Carnitine Shuttle as Control Point

  • Significance: Rate-limiting step for fatty acid oxidation in mitochondria.

  • Inhibition: Carnitine acyltransferase 1 is inhibited by malonyl-CoA, preventing simultaneous fatty acid synthesis and degradation.

Stages of Fatty Acid Oxidation

  • Stage 1: β Oxidation of fatty acids to release acetyl-CoA.

  • Stage 2: Oxidation of acetyl-CoA into CO2 in the citric acid cycle, yielding NADH, FADH2, and GTP.

  • Stage 3: Electron transport chain and oxidative phosphorylation, generating ATP from NADH and FADH2.

β Oxidation of Saturated Fatty Acids - Four Basic Steps

  1. Dehydrogenation: Catalyzed by acyl-CoA dehydrogenase, yielding trans-∆2-enoyl-CoA.

  2. Hydration: Addition of water to the double bond of trans-∆2-enoyl-CoA, forming L-β-hydroxyacyl-CoA.

  3. Oxidation: Dehydrogenation of L-β-hydroxyacyl-CoA, resulting in β-ketoacyl-CoA.

  4. Cleavage: Catalysis by acyl-CoA acetyl-transferase (thiolase) produces acetyl CoA and a shortened fatty acyl-CoA.

The Chemical Logic of β-Oxidation Sequence

  • Reactions: Convert stable single bonds between methylene groups into less stable bonds, allowing nucleophilic attack and cleavage.

  • Functionality: Terminal –CH2–CO–S-CoA serves as a leaving group facilitating breakage of the α–β bond.

Overall Reaction for One Pass Through Stage 1 of β Oxidation

  • Starting with Palmitoyl-CoA:
    ext{palmitoyl-CoA} + ext{CoA} + ext{FAD} + ext{NAD}^+ + ext{H}2 ext{O} ightarrow ext{myristoyl-CoA} + ext{acetyl-CoA} + ext{FADH}2 + ext{NADH} + ext{H}^+

ATP Yield from FADH2 and NADH

  • FADH2: Each generates 1.5 ATP.

  • NADH: Each generates 2.5 ATP.

  • Total ATP: 4 ATP generated per pass through β oxidation.

Complete Oxidation of Palmitoyl-CoA

  • Overall Reaction Including Electron Transfers:
    ext{palmitoyl-CoA} + 7 ext{CoA} + 7 ext{O}2 + 28 ext{Pi} + 28 ext{ADP} ightarrow 8 ext{acetyl-CoA} + 28 ext{ATP} + 7 ext{H}2 ext{O}

Conclusions

  • Final Yield for Complete Oxidation:
    ext{palmitoyl-CoA} + 23 ext{O}2 + 108 ext{Pi} + 108 ext{ADP} ightarrow ext{CoA} + 108 ext{ATP} + 16 ext{CO}2 + 23 ext{H}_2 ext{O}

Enzymatic Processes in Oxidation Steps

Enzyme

NADH/FADH2 Produced

Total ATP Generated

β Oxidation - Acyl-CoA dehydrogenase

7 FADH2

10.5

β-Hydroxyacyl-CoA dehydrogenase

7 NADH

17.5

Citric acid cycle

Isocitrate dehydrogenase

8 NADH

20

α-Ketoglutarate dehydrogenase

8 NADH

20

Succinyl-CoA synthetase

Succinate dehydrogenase

8 FADH2

12

Malate dehydrogenase

8 NADH

20

Total

108

Oxidation of Monounsaturated Fatty Acids

  • Isomerization Requirement: Requires enoyl-CoA isomerase to convert cis-∆3-enoyl-CoA to trans-∆2-enoyl-CoA.

Oxidation of Linoleoyl-CoA and Odd-Number Fatty Acids

  • Oxidation Requirements: Complete oxidation of odd-number fatty acids requires extra steps involving propionyl-CoA.

Reactions of Propionyl-CoA Oxidation

  1. Step 1 - Catalyzed by propionyl-CoA carboxylase; requires biotin, forms D-methylmalonyl-CoA.

  2. Step 2 - Epimerization by methylmalonyl-CoA epimerase to L-methylmalonyl-CoA.

  3. Step 3 - Rearrangement by methylmalonyl-CoA mutase to succinyl-CoA (requires coenzyme B12).