post midterm env s 60

L10: Nov 1, 2024

Niche

  • Fundamental Niche

    • The entire range of environmental conditions under which a species can survive and reproduce

What do organisms need to survive and reproduce

  • Plants

    • Water

    • Light

    • Soil and or water nutrients

    • Physical space

  • Animals

    • Food (nutrients, water)

    • Territory

    • Mating partners

  • Organisms need to compete for limited resources

EX)

  • Can two species with the same fundamental niche coexist?

    • Single-celled paramecium (protozoans

    • Two species

      • Each species, grew in a culture by themselves

      • Looked at growth in population over time

        • Both grew and then levled out

      • Then put them together

        • P aurelia increased

        • P caudatum eventually decreases

      • SHOWS: competitive exclusion principle 

  • ANSWER: 

    • No-they compete for shared resources and one species will out compete the other one

    • Thus at least one species will not be able to exist in its entire fundamental niche

Realized Niche

  • The fundamental niche, but restricted by species interactions

  • The subset of the fundamental niche describing the conditions under which an organism actually lives

Exceptions to the competitive exclusion

  • Paradox of the plankton

    • How can hundreds of species of phytoplankton exist within a small sample of ocean water? Why doesn’t competitive exclusion occur

      • They are all interacting together and living with each other

Repercussion of Competition

  • Both organisms completing with each other are negatively impacted

  • EX)

    • Decrease growth rated

    • Increased mortality

    • Reduced reproductive capacity

Types of Competition

  • Interference

    • Individuals or populations behave in a way that reduces exploitation efficiency or another individual or population

  1. Allelopathy

    1. Use of secondary chemicals by one species of individuals that inhibit the growth, survival or education of another

  2. Territoriality

    1. The establishment of an area by one or more organism from which others are at leat partly exclude

    2. Only animals = must be mobile to protect territory

  3. Preemption

    1. Individuals prevent other individuals from occupying a location by occupying the space first

  • Scramble or Exploitation

    • Individuals or populations depress one another through use of a shared resource

  • Allelopathy

Week 6

L11: Nov 6, 2024

Intraspecific 

  • Between individuals of the same species

Interspecific 

  • Between individuals of other populations

Demographic pattern

  • Growth rate = birth rate

Per Capita Population Growth Rate (r)

Exponential growth

  • dN/dt = rN

    • R = per capita growth rate aka intrinsic growth rate

      • Does not change over time

      • EX)

        • r>0: population is increasing

        • r<0:  population is decreasing

        • r=0: population is stable

    • dN/dt = population growth rate (instantaneous)

      • Does change over time

      • EX)

        • dN/dt >0: increasing

        • dN/dt<0: decreasing

        • dN/dt=0: stable

Intrinstic Growth rate ®

KEy points

  • Unlimited resources

    • No competition

    • Populations can grow exponentially at their intrinsic rate of growth

  • Limited resources

    • As population density increase, intraspecific competition increases

      • Reduced fitness for individuals

        • Size, survival birth

    • Population exhibit logistic growth where their 

Lotka -Volterra Equations- competition coefficients

  • A12

    • The effect ON species 1 by species 2

      • How species 2 affects species 1

  • A21

    • The effect ON species 2 by species 1

      • How species 1 affects species 2

Phase Plane Diagram

  • Zero growth isoclines

Week 7

L13: Nov 13, 2024

Community Dynamics

Food Chains and Indirect Effects

  • Top-Down Control:

    • Community structure is determined by consumers

  • Bottom-Up Control:

    • Community stricture is determined by resource availability

  • TopDown Trophic Cascades:

    • Specific type of top down effect where the addition or removal of a top carnivore has an effect that cascades down to primary producers at the bottom of the chain

  • When are primary producers abundant?

  • Top-Down Hypothesis

    • If the world looks green…

      • Plants not limited by herbivory

      • Herbivores are limited by predations

      • Food chain length determines whether or not herbivores limit plants

      • EX)

        • If the world looks green, what is true?

          • Herbivores are not limiting the plants

          • Predators are limiting herbivores

        • Sea otter→urchin→kelp:

          • High kelp biomass

        • Orca→sea otter→urchin→ kelp:

          • Low kelp biomass

  • Bottom-Up Control Hypothesis

    • Communities that aren’t green lack certain nutrients (nitrogen, phosphorus)

    • Where the world is green (has high net primary productivity) is driven by climate (temperature and precipitation)

    • Organisms at each trophic level are resource-limited

      • Food-chain length increases as resource availability increases

  • How should we describe the world?

    • Top-Down: deserts are brown because predators are rare and herbivores limit primary production

    • Bottom-Up: Deserts are brown because resources are scarce and net primary production is low

      • BOTH WORK!

  • False Dichotomy? Role of Distrubrance

    • Need the base of the food web to be established/reestablished post-disturbance before top-down forces could impact community structure

  • Yellowstone 

    • Wolves reintroduced

      • Elk eat the aspen

Ecosystem Engineers

  • Must alter the availability of environmental resources

    • Light, water, heat, temperature

  • Autogenic Engineers

    • Alter the environment through their own physical structures

      • Trees provide shade

      • Corals buffer waves

  • Allogenic Engineers

    • Alter the environment through building structures

      • Beavers build dams that modify water availability

What determines food-chain length

  1. Producvitivy Hypothesis

    1. Productivity increases → food chain length increases

  2. Ecosystem-size hypothesis

    1. About physical size of ecosystem

      1. Small lake can only support a few level of trophic levels

      2. Big lake can support a larger amount of trophic levels

      3. Productivity has no effect

  3. Productive-Space Hypothesis

    1. Both size of ecosystem and productivity affects what can be support

      1. As size increases, can have more food chains

      2. As productivity increases, can have more food chains

Community stability questions

  1. How big of a change did the disturbance cause

    1. Resistance 

  2. How quickly did the community recover from this change

    1. Return time

  3. How closely did the post-recovery community resemble the pre-disturbance community

    1. resilience

Too much disturbance can lead too:

  • Alternative stable states

    • When different types of communities can exist in a particular environment

      • Same lake with different conditions

      • Coral reef systems

        • Healthy coral reef vs reef affected by storms and hurricanes not allowing it to recover, stays in alternative state

What promotes stability

  • Diversity 

    • Allows it to be more stable, resilient, + quicker return times

  • Connectance

  • Keystone and Dominant species

    • Dominant species have lots of biomass (trees, corals, kelp) + high impact

    • Keystone species have high impact and low proportional biomass

Non-Endemic / Introduced Species

  • Not endemic to a community

  • Spread /transported to a new community

  • Many of not2 disrupt communities

  • Those that do are considered nuisance species

  • Change communities impact local economies

L14: Nov 15, 2024

Ecological Levels of Organization

  • Everything above level is included

    • Biosphere includes biome, landscape, ecosystem, community, population and individual

Species Interactions

  • Exploitations: 

    • Positive effect on one species

    • Negative effect on another species

  • Parasitism

    • What is a parasite

      • An organism that live on or in another organism

      • Uses the host for energy

        • Consuming host tissue or body fluids

      • Not killing it at all, or at least for a really long time

      • Active:

        • Parasites moves on its own

          • EX) swimming lamprey

      • Passive:

        • Parasites lurking for host

          • EX) tick sitting on a leaf waiting for host to walk by

      • Endoparasites:

        • Parasites live in its host

          • EX) tapeworm

      • Ectoparasites:

        • Parasite lives outsides or on top of its host

          • EX) cordyceps fungus on ants

      • FINAL QUESTION:

        • Mosquitos are what type of parasite

          • Ecto with active transmission

  • Herbivory

    • Grazers

      • Eat grasses

        • EX) zebra

    • Browers

      • Eat leaves bark twigs

        • EX) deer

    • Granivores

      • Eats seeds

        • EX) small birds, rodents

    • Frugivores

      • Eat fruits

        • EX) toucans, monkey

    • Some fall into multipole or all

      • EX) Microtus californicus

      • EX) humans

    • Plant Defenses Against Herbivory

      • Chemical:

        • noxious/poisonous chemicals to herbivores

          • EX) chili pepper

        • Mechanical:

          • Physical structural deterrents

            • EX) spikes on cactus

            • EX) thorns on rose bush

        • Nutritional: 

          • Low P and N content

          • Low nutritional content, so animal would gain minimal/ no benefits from consuming it

        • Tolerant:

          • Regrow quickly

    • Herbivore Effects on Communities through Top-Down Controls

  • Predation 

    • Chemical:

      • Chemicals that are noxious, poisonous or disruptive to predators

    • Physical:

      • Physical barriers to predation

        • EX) spines and shells

    • Aposematism:

      • Warning colors, smells, etc. signaling “i taste bad”

        • EX) monarch butterflies, colorful amphibians

    • Crypsis: 

      • the ability of an organism to conceal itself especially from a predator by having a color, pattern, and shape that allows it to blend into the surrounding environment.

    • Mimicry:

      • Looking, sounding, or seeming like other pieces that predators do not like

        • Bastesian vs Mullerian mimicry

          • Mullerian: 

            • Mimicking something else that is like you and is gross and tastes bad

            • Perpetuating idea that things like them don’t taste good, so avoid things like them

              • EX) monarch butterfly

          • Bastesian

            • Prey tricking the predators that they are a poisonous animal

              • EX) king snake vs coral snake

    • They go hand in hand

      • Mimicry and Crypsis

        • Often doing both

          • Animals often mimic their environment in order to camouflage

        • Most crypsis is mimicry

        • Mimicry is not likely to be crypsis

    • Combo Package

      • Sea urchin: physical and behavioral

      • Mackerel: crypsis and behavioral

        • Countershading

        • Schooling 

      • Horned lizard:

        • Behavior: squirts blood

        • Chemical: blood is toxic to dogs

        • Crypsis: looks like dirt/docks

        • Behavior: inflate their bodies

    • Predation Strategies

      • Stalking:

        • Follow prey and then strike

      • Pursuit:

        • Chase via flying, running swimming

      • Ambush: 

        • Wait for prey to come to you

      • Random Encounter:

        • Randomly find something you want to eat

    • Lokta & Vikterr: 

      • Interspecific COmpetition

      • Predator and prey

        • How fast a growth rate is changing in the presence of one another

          • How fast is the prey population changing because of predators

          • How fast is the predator population changing because of prey

        • When we assume:

  1. The predator species is totally dependent on a single prey species as its only food supply

  2. The prey species ahs an unlimited supply of food

  3. There is no threat to the prey other than the specific predator

  • When do we use equations?

    • When we want to calculator prey/predator population growth rates in the presence of one another

  • Conversion rate:

    • How efficient 

Week 10

L17: Dec 4, 2024

Final

  • December 11 @ 8 AM

Climate Change

Terminology

  • Weather

    • Short term changes in atmospheric conditions (temperature, wind, precipitation)

    • Occurs over shorter time scales (minutes to months)

  • Climate

    • Mean weather conditions over longer time scales

    • Typically multiple decades

  • Climate change

    • Persistent change in climate

    • General term includes many different phenomena

    • Natural vs anthropogenic 

      • Natural: cycles that happen with or without human interferences

        • Fluctuations in solar, plate tectonics

        • El nino vs la niña

      • Anthropogenic: climate change due to human activity

        • Comes from release of carbon and greenhouse gases

  • Global warming

    • Anthropogenic increases in mean surface temperature

    • More narrow than climate change

    • Symptom of climate change

    • Due to greenhouse effect

      • Greenhouse effect

        • Causes global warming

        • Greenhouse gasses trapped and creates global warming

  • Anomalies

    • Difference between observed value and mean value

    • How much does my value differ from the mean value?

  • Signal

    • Meaningful information

    • The trend

    • What is the data actually showing?

    • What is the conclusion?

  • Noise

    • The variability, or the error, around the trend

    • Part of the data that may be obscuring the trends of obscuring the conclusion

  • Anomalies and Noise are related

    • Anomaly as measure of how much one data point may be contributing to the noise

      • The lower the anomalies, the less the noise 

Types of Thermy

  • Endothermy: relies on internal heat production

  • Ectothermy: relies on external heat production

  • Homeothermy: constant body temperature

  • Poikilothermy: variable body temperature 

Thermal Performance Curve

  • pMax: top line

  • Topt: optimal temperature

  • CTmin:

  • CTmax:

  • EX)

    • Surf clam vs bay scallop 

  • Population Level

    • Ladybugs

      • Measures population size growth rate at 6 different temperatures

        • r= slope of growth rate curve

  • Spatial Variation in Temperature Changes

    • Land absorbs more heat than water

    • Why?

  1. Specific heat capacity

    1. Water SHC > Air SHC

      1. Air temperature increases faster

  2. Heat Distribution

    1. Oceans spread heat to deeper depths

  • Positive feedback mechanisms

    • Land has albedo effects

      • Meting ice/snow albedo (heat reflectivity) and increases heat absorption because ice/snow is white (more white = more reflectivity) and underlying ocean water is dark (more dark = more absolution)

        • This amplifies warming over land

  • Negative Feedback Loop

    • The cause (warming is NOT the same as the effect

    • The end result (cooling is the opposite of the initial trigger (warming)

    • Warming → increased evaporation → increased cloud cover → less heat is absorbed → less heat is absorbed → cooling

  • Which areas warm the most

    • High latitudes of the northern hemisphere

      • More ice/snow = more albedo effects

      • Atmospheric circulation patterns

        • Air moves from the equator towards the poles = more warming at the poles

      • Lower baseline

    • Northern hemisphere warming > southern hemisphere warming

      • More water in south hemisphere (more land in the northern hemisphere) and water has a higher SHC

Assessing Historical Temperature trends

  • Proxies

    • Tree growth rings

    • During winter, trees stop growing, this creates the dark lines

    • When they start growing again, the space between the dark lines starting forming

    • Warmer years = more space between annual growth rings

    • Ocean Quahogs

      • Produce growth rings like trees

      • Can be used as proxies for temperature

  • Ice Cores

    • Ration of Oxygen (and Hydrogen) isotopes in water change with temperature

Natural Climate cycles

  • Milankovitch Cycles

    • Changes in earth’s orbit, tilt and wobble

      • Degree of wobble affects how much heat we receive, the temperature

  • Other planets

    • This gravitational tug of war between earth and mars drives a 2.4 million year cycle of global warming and cooling

      • Effects our place in the solar system

        • Effects how close we are to the sun

          • Effects how much heat we get

  • Regional pressure differences

    • Cycle in air pressure affect regional wind patterns and therefore temperature and precipitation

    • La nina/ el nino, north pacific oscillation, atlantic multidecadal oscillation

L18: December 8, 2024

Final

  • 15 multiple choice questions (30 points)

  • 10 true false questions (10 questions)

  • 10 fill in the bank questions (10 points)

  • Remaining 50 points = short answer and scenario questions

Reel Solutions

  • Exploring the impact of eco-labels on fishery + aquaculture practices & consumer behavior 

  • Seafood provides essential nutrients to over 3 billion people worldwide

  • We harvest over 179 tons of seafood

  • The USA imports 88% of seafood annually

How do consumers know what sustainable

  • Certifications and ratings

Key insights

  • Consumer findings:

    • Gap between intentions and purchases

    • Guided by health benefits and prices

    • Communication + education gap

  • Traceability

    • Challenging to pinpoint where seafood originates

    • Larger issues internationally

    • Difficult monitoring catch data

FINAL: ASK about recruitment, how are larvae related

Fishiers and Ecology

Fisheries

  • A fishing ground of area where fish are caught

  • The occupation or industry of catching fish

  • The act of removing fish

  • The specific type of fish being caught 

  • Not just fish

    • Includes shellfish]

  • NOT fisheries:

    • Corporation, partnerships and their products

      • They support fisheries, but they themselves are not fisheries

Growth

  • Growth leads to healthy, sustainable fisheries and stocks

  • Individual level:

    • Affected by many things such as temperatures and density dependent factors

      • ex) food

  • Population level:

    • Affected by many things such as temperature, density dependent factors, predation, fishing pressure and recruitment

Recruitment

  • Recruitment leads to population growth

    • The process by which new individuals enter a population and become part of the fishable stock

    • The amount of new individuals that enter the population

    • The fate of earlier life stages

    • Without recruitment, without new individuals entering the population, the population cannot grow

  • You can think of it in terms of year class strength

    • “ 2021 was a good recruitment year”

      • Means a lot of new individuals population that year

  • Tracking what happens to larvae through their life time

  • Broadcast spawning

    • External 

Final Review

  • Population level:

    • Multiple organisms of the same species

  • Community Level:

    • Multipole populations, multiple individuals of different species

  • Ecosystem:

    • Multiple populations including abiotic factors

  • Pelagic Trophic Cascade:

    • Circle size represents population size

  • Density Dependence

    • Clam size/ growth rate and 5 density class

      • A is low density class

      • E is high density class (has a lot more individuals per area)

        • A reaches higher numbers

        • E doesn’t 

      • Do we have evidence of density dependent growth?

        • Yes, we see differences in growth rate

      • DISREGARD: connectance, community importance, and total impact, 

      • THEY GIVE EVERY MATH EQUATION BUT WE NEED TO KNOW HOW TO USE IT

Questions

  1. Which of the following biological levels of organization typically include multiple individuals of the same species?

    1. All the above: population, community, ecosystem

  2. Which of the following biological levels of organization only include multiple individuals of the same species?

    1. Population 

  3. Intraspecific competition primarily occurs at which biological level of organization?

    1. Population