Seeley's Anatomy & Physiology - Chapter 1: The Human Organism

Overview and Foundations of Anatomy and Physiology

  • Core Definitions:

    • Anatomy: The scientific discipline that investigates the body's structure.

    • Physiology: The scientific investigation of the processes or functions of living things.

  • Scope and Purpose of Physiology:

    • Studies the chemistry and physics of anatomical structures and how they function together to support life processes.

    • Focuses extensively on the body's dynamic tendencies toward maintaining a stable internal environment.

    • Reveals the dynamic nature of living organisms rather than static physical forms.

  • Interdependence of Anatomy and Physiology:

    • Anatomy and physiology are interlinked and studied together because changes in structure directly impact function, and changes in function alter structure.

    • Structure and function are mutually dependent.

  • Fields Integrating Anatomy and Physiology:

    • Pathology: The branch of medical science concerned with structural and functional changes caused by disease.

    • Exercise Physiology: The study of structural and functional changes induced by physical exercise.

Branches of Anatomy and Physiology

  • Branches of Anatomy:

    • Gross Anatomy: The examination of structures that can be analyzed without the aid of a microscope.

    • Regional Anatomy: Body structure studied area by area (e.g., head, abdomen, or thorax).

    • Systemic Anatomy: Body structure studied system by system (e.g., cardiovascular system, nervous system).

    • Surface Anatomy: The study of external body forms and their anatomical relations to deeper structures (such as x-ray visualization in anatomical imaging).

    • Microscopic Anatomy: Study of structures so small that they require the aid of a microscope for visualization.

    • Cytology: The structural study of individual cells (cellular anatomy).

    • Histology: The structural study of tissues and their cellular composition.

  • Branches of Physiology:

    • Cell Physiology: Examines the biochemical and biophysical processes occurring within individual cells.

    • Systemic Physiology: Examines the functional operations of entire organ systems.

    • Neurophysiology: Focuses specifically on the physiological functions of the nervous system.

    • Cardiovascular Physiology: Focuses on the functions and mechanisms of the heart and blood vessels.

Medical Imaging Techniques

  • Overview of Anatomical Imaging:

    • Non-invasive diagnostic procedures used to visualize structural and functional features inside the human body.

  • X-Ray (Radiography):

    • Mechanism: Uses extremely shortwave electromagnetic radiation passed through the body to expose a photographic plate, creating a radiograph (rā'dē-ō-graf).

    • Differential Absorption: Dense anatomical structures (such as bones) and radiopaque dyes absorb the radiation, creating underexposed regions that appear white on photographic film.

    • Major Limitation: Produces flat, two-dimensional (2-D2\text{-D}) shadow projections where overlying anatomical structures overlap.

  • Ultrasound (Sonography):

    • History: Developed in the early 1950s as the second-oldest imaging technique, adapted from World War II sonar technology.

    • Mechanism: Uses high-frequency sound waves emitted from a transmitter-receiver transducer placed against the skin over the region being scanned.

    • Signal Reflection: Sound waves strike internal soft tissues and organs, bouncing back to the skin receiver.

    • Computer Processing: A computer analyzes the precise pattern of reflected sound waves and projects the data onto a monitor as a sonogram (son'ō-gram) image.

    • Recent Advances: Advanced high-speed computing enables analysis of positional movement in "real-time."

    • Clinical Application: Widely utilized to evaluate fetal development and monitoring during pregnancy.

  • Computed Tomography (CT Scan):

    • History: Developed in 1972 and originally named computerized axial tomographic (CAT) scanning.

    • Mechanism: A low-intensity x-ray tube rotates through a full 360360^\circ arc around the patient while feeding raw attenuation data into a computer.

    • Slice Reconstruction: The computer calculates x-ray absorption to reconstruct a clear cross-sectional "slice" through the targeted body plane.

    • Three-Dimensional Imaging: Computers can process multiple closely spaced contiguous scans, stacking slices to generate a detailed three-dimensional (3-D3\text{-D}) image of a body region.

  • Magnetic Resonance Imaging (MRI):

    • Mechanism: Directs non-ionizing radio waves at a patient placed inside a powerful electromagnetic field.

    • Proton Alignment: The electromagnetic field forces the magnetic moments (protons) of various tissue atoms to align. Because of the high abundance of body water, hydrogen atom protons are the primary targets.

    • Radio Frequency Pulse: Specific radio wave frequencies alter hydrogen proton alignment; when turned off, protons realign with the background magnetic field.

    • Tissue Relaxation Time: The duration required for hydrogen protons to realign varies across distinct soft tissues, which computer algorithms translate into high-resolution sectional images.

    • Clinical Effectiveness: More effective at detecting soft-tissue abnormalities and certain forms of cancer than CT scanning.

  • Positron Emission Tomography (PET Scan):

    • Functional Purpose: Identifies the metabolic activity and functional state of target tissues rather than mere structural anatomy; highly valuable for brain analysis.

    • Metabolic Basis: Active living cells consume glucose (blood sugar) for cellular energy generation.

    • Mechanism: Patients receive an administration of radioactively treated ("labeled") glucose, which is rapidly taken up by metabolically active cells.

    • Annihilation Physics: As the radioactive label decays, it emits positively charged subatomic particles called positrons. Positrons collide with cellular electrons, causing complete mutual annihilation and emitting high-energy gamma rays.

    • Detection: Gamma-ray detectors locate the exact origin of radiation emissions, producing maps of metabolic activity.

Structural and Functional Organization of the Human Body

  • The Six Hierarchical Levels of Organization:

    1. Chemical Level: Subatomic particles combine to form atoms; atoms combine into molecules; complex molecules form functional subcellular organelles.

    2. Cellular Level: Cells are the fundamental structural and functional units of life, composed of organelles performing localized operations.

    3. Tissue Level: Groups of similar cells working together alongside surrounding extracellular materials to perform specialized structural or functional tasks.

    4. Organ Level: Composed of two or More distinct tissue types integrated to execute one or more distinct physiological functions.

    5. Organ System Level: Groups of interconnected organs working in close coordination to perform complex body functions.

    6. Organismal Level: The highest level of organization; all organ systems operating synchronously within a single, complete living individual.

  • Major Internal Organs of the Body:

    • Brain and Spinal Cord

    • Lungs and Heart

    • Liver, Gallbladder, Pancreas (located posterior to stomach), Spleen (located posterior to stomach), and Stomach

    • Kidneys (located posterior to stomach and intestine), Small Intestine, Large Intestine, Ureters, and Urinary Bladder

Eleven Major Human Organ Systems

  • 1. Integumentary System:

    • Functions: Provides structural protection, regulates body temperature, prevents systemic water loss, and assists in synthesis of vitamin D.

    • Components: Skin, hair, nails, and sweat glands.

  • 2. Skeletal System:

    • Functions: Provides physical protection and framework support, enables body movements, produces blood cells via hematopoiesis, and stores minerals and adipose tissue.

    • Components: Bones, associated cartilages, ligaments, and joints (specifically including skull, ribs, clavicle, sternum, humerus, vertebral column, pelvis, radius, ulna, femur, tibia, and fibula).

  • 3. Muscular System:

    • Functions: Produces body movement, maintains functional posture, and generates metabolic body heat.

    • Components: Muscles attached to the skeleton via tendons (specifically including temporalis, pectoralis major, biceps brachii, rectus abdominis, sartorius, and quadriceps femoris).

  • 4. Nervous System:

    • Functions: Major regulatory system that detects sensory inputs, controls voluntary and involuntary movements, coordinates physiological processes, and mediates intellectual capabilities.

    • Components: Brain, spinal cord, nerves, cauda equina, and sensory receptors.

  • 5. Endocrine System:

    • Functions: Major regulatory system that secretes chemical messengers (hormones) directly into blood to influence metabolic activity, physical growth, cellular reproduction, and systemic functions.

    • Components: Glands including hypothalamus, pituitary, thyroid, parathyroids (posterior aspect of thyroid), thymus, pineal gland, adrenals, pancreas (islets), ovaries (female), and testes (male).

  • 6. Cardiovascular System:

    • Functions: Transports nutrients, metabolic waste products, gases (O2\text{O}_2 and CO2\text{CO}_2), and hormones throughout the vascular network; contributes to immune response and thermoregulation.

    • Components: Heart, blood vessels (carotid artery, jugular vein, brachial artery, superior vena cava, inferior vena cava, pulmonary trunk, abdominal aorta, femoral artery and vein), and blood.

  • 7. Lymphatic System:

    • Functions: Filters foreign substances and debris from lymph and blood, combats infectious pathogens, maintains interstitial fluid balance, and absorbs dietary fats from the digestive tract.

    • Components: Lymphatic vessels, lymph nodes (cervical, axillary, inguinal), tonsils, thymus, spleen, thoracic duct, mammary plexus, and appendix.

  • 8. Respiratory System:

    • Functions: Exchanges oxygen and carbon dioxide between atmospheric air and circulating blood, and regulates systemic blood pH.

    • Components: Lungs and air passages (nasal cavity, nose, pharynx [throat], larynx, trachea, and bronchi).

  • 9. Digestive System:

    • Functions: Performs physical and chemical breakdown of ingested food, absorbs cellular nutrients, and eliminates solid indigestible wastes.

    • Components: Mouth (oral cavity), salivary glands, pharynx (throat), esophagus, stomach, liver, gallbladder, pancreas, small intestine, large intestine, rectum, and anus.


  1. Urinary System:

  • Functions: Removes metabolic waste products from blood, excretes urine, and regulates blood pH, ion balance, and body water balance.

  • Components: Kidneys, ureters, urinary bladder, and urethra.


  1. Reproductive Systems:

  • Female Reproductive System:

  • Functions: Produces oocytes, serves as site of fertilization and fetal development, synthesizes milk for infant nourishment, and secretes hormones influencing sexual function and behaviors.

  • Components: Ovaries, uterine tubes, uterus, vagina, mammary glands (in breasts), and associated structures.

  • Male Reproductive System:

  • Functions: Produces and transfers sperm cells into female tract, and secretes hormones influencing sexual functions and behaviors.

  • Components: Testes, epididymides, ducti deferentes, seminal vesicles, prostate gland, penis, accessory structures, and ducts.

Characteristics of Human Life

  • Six Essential Functional Characteristics:

    1. Organization: Condition in which functional parts of an organism maintain specific structural and functional relationships to one another.

    2. Metabolism: The sum of all chemical reactions taking place within the body.

    3. Responsiveness: The biological ability to sense changes in internal or external environments and execute appropriate adjustments.

    4. Growth: An increase in overall biological size and/or total cell number.

    5. Development: Changes an organism undergoes over time from origin to maturity.

    • Differentiation: The structural and functional specialization of generalized cells into dedicated cell types.

    • Morphogenesis: The structural changes in the shape and organization of tissues and organs.

    1. Reproduction: The formation of new cells for tissue growth and repair, or the production of new individual organisms.

Homeostasis and Feedback Mechanisms

  • Concepts of Homeostasis:

    • Definition: Maintenance of a relatively constant internal body environment despite continuous changes in the surrounding external environment.

    • Dynamic State: A dynamic state of equilibrium, continuously monitoring and readjusting as physiological needs dictate.

    • Organ Coordination: Maintained through coordinated actions of all 11 organ systems.

    • Physiological Fluctuations: Variables (e.g., core body temperature, arterial blood pressure) fluctuate around a specific target baseline.

    • Set Point: The ideal normal physiological value around which a variable fluctuates.

    • Normal Range: The restricted band of values surrounding the set point that is optimally healthful and stable.

  • Functional Components of Feedback Loops:

    • Receptor: Sensory structure that monitors a specific variable by detecting changes or deviations (stimuli).

    • Control Center: Neural or endocrine center (such as the brain's hypothalamus) that sets the physiological set point, processes receptor inputs, and initiates target responses.

    • Effector: Biological component that carries out output responses to adjust the variable's state.

  • Negative Feedback Mechanisms:

    • Primary Function: The primary control mechanism regulating most body systems.

    • Action: Counteracts or negates deviations in a variable, decreasing the change to return the variable back toward its set point.

    • Physiological Example 1 — Body Temperature Regulation:

    • Increased Temperature Pathway: Body temperature increases -> Skin receptors detect rise -> Brain control centers (hypothalamus) increase signal output to sweat glands and dilate skin blood vessels -> Sweat glands produce sweat; skin blood vessels dilate -> Body cools via evaporation and heat radiation -> Homeostasis restored -> Response stops once set point is reached.

    • Decreased Temperature Pathway: Body temperature decreases -> Skin receptors detect drop -> Control centers decrease sweat gland activity, constrict skin blood vessels, and stimulate skeletal muscle shivering -> Heat production increases -> Body temperature rises to set point -> Homeostasis restored.

    • Physiological Example 2 — Blood Pressure Adjustments During Exercise:

    • Dynamic Range Resetting: Skeletal muscles demand elevated oxygen delivery during exercise.

    • Mechanism: Control centers raise blood pressure (BP) and cardiac output, resetting the normal range higher and broader during physical strain.

    • Post-Exercise Recovery: Following exercise cessation, control mechanisms restore blood pressure ranges to resting baseline parameters.

  • Positive Feedback Mechanisms:

    • Primary Function: Amplifies or increases deviations away from the original baseline value.

    • Homeostatic Deviation: Uncommon under normal healthy conditions; drives values away from homeostasis and can result in death if unmonitored.

    • Effector Action: Drives variables progressively further past set points until an outside stimulus-terminating event occurs.

    • Normal/Beneficial Positive Feedback Examples:

    • Childbirth (Parturition): Uterine contractions trigger cervical stretch, stimulating oxytocin release to cause stronger contractions until delivery occurs.

    • Lactation: Suckling stimulates hormone release to eject milk, continuing until suckling stops.

    • Blood Clotting: Cascade activation of clotting enzymes rapidly accelerates clot formation to seal blood vessel defects.

    • Harmful Positive Feedback Example — Severe Hemorrhage:

    • Severe blood loss -> Systemic blood pressure drops -> Blood flow to cardiac muscle decreases -> Heart's pumping capacity weakens -> Blood pressure drops further -> Progressive spiral leads to circulatory collapse and death.

Anatomical Position and Directional Terminology

  • Reference Positions:

    • Anatomical Position: Body standing erect, face directed forward, feet together, and upper limbs hanging at sides with palms facing forward.

    • Supine: Lying horizontal with face and anterior surface turned upward.

    • Prone: Lying horizontal with face and anterior surface turned downward.

  • Directional Terms (Table 1.2 Etymologies and Definitions):

    • Right: Toward the right side of the body (e.g., Right ear).

    • Left: Toward the left side of the body (e.g., Left eye).

    • Superior (Latin higher): Placed higher or above another structure (e.g., The chin is superior to the navel).

    • Inferior (Latin lower): Placed lower or below another structure (e.g., The navel is inferior to the chin).

    • Cephalic (Greek kephale, head): Positioned closer to the head than another structure; synonymous with superior (e.g., The chin is cephalic to the navel).

    • Caudal (Latin cauda, tail): Positioned closer to the tail than another structure; synonymous with inferior (e.g., The navel is caudal to the chin).

    • Anterior (Latin before): Positioned toward the front of the body (e.g., The navel is anterior to the spine).

    • Posterior (Latin posterus, following): Positioned toward the back of the body (e.g., The spine is posterior to the breastbone).

    • Ventral (Latin ventr-, belly): Positioned toward the belly; synonymous with anterior (e.g., The navel is ventral to the spine).

    • Dorsal (Latin dorsum, back): Positioned toward the back; synonymous with posterior (e.g., The spine is dorsal to the breastbone).

    • Proximal (Latin proximus, nearest): Closer to the point of attachment to the body trunk relative to another structure (e.g., The elbow is proximal to the wrist).

    • Distal (Latin di- plus sto, to stand apart or be distant): Farther from the point of attachment to the body trunk relative to another structure (e.g., The wrist is distal to the elbow).

    • Lateral (Latin latus, side): Positioned away from the longitudinal midline of the body (e.g., The nipple is lateral to the breastbone).

    • Medial (Latin medialis, middle): Positioned toward the longitudinal midline of the body (e.g., The nose is medial to the eye).

    • Superficial (Latin superficialis, toward the surface): Positioned toward or on the outer surface (e.g., The skin is superficial to muscle).

    • Deep (Old English deop, deep): Positioned away from the surface, internal (e.g., The lungs are deep to the ribs).

Regional Anatomy and Body Divisions

  • Cephalic Region (Head):

    • Frontal: Forehead

    • Orbital: Eye

    • Nasal: Nose

    • Oral: Mouth

    • Otic: Ear

    • Buccal: Cheek

    • Mental: Chin

    • Occipital: Base of skull

    • Cranial: Skull

  • Cervical Region (Neck):

    • Cervical: Neck

    • Nuchal: Back of neck

  • Thoracic Region (Chest):

    • Clavicular: Collarbone

    • Pectoral: Chest

    • Sternal: Breastbone

    • Mammary: Breast

    • Axillary: Armpit

  • Dorsal Region (Back):

    • Scapular: Shoulder blade

    • Vertebral: Spinal column

    • Lumbar: Lower back

  • Abdominopelvic Region:

    • Abdominal: Abdomen

    • Umbilical: Navel

    • Pelvic: Pelvis

    • Inguinal: Groin

    • Pubic: Genitals

    • Sacral: Region between hips

    • Gluteal: Buttock

    • Perineal: Perineum

  • Upper Limb Region:

    • Acromial: Point of shoulder

    • Brachial: Arm

    • Antecubital: Front of elbow

    • Olecranon: Point of elbow

    • Antebrachial: Forearm

    • Carpal: Wrist

    • Manual: Hand

    • Palmar: Palm

    • Dorsum: Back of hand

    • Pollex: Thumb

    • Digital: Fingers

  • Lower Limb Region:

    • Coxal: Hip

    • Femoral: Thigh

    • Patellar: Kneecap

    • Popliteal: Hollow behind knee

    • Crural: Leg

    • Sural: Calf

    • Pedal: Foot

    • Talus: Ankle

    • Calcaneal: Heel

    • Dorsum: Top of foot

    • Plantar: Sole

    • Hallux: Big toe

    • Digital: Toes

  • Abdominopelvic Quadrants (Four-Quadrant Division):

    • Right-Upper Quadrant (RUQ)

    • Left-Upper Quadrant (LUQ)

    • Right-Lower Quadrant (RLQ)

    • Left-Lower Quadrant (LLQ)

  • Abdominopelvic Regions (Nine-Region Division):

    • Top Row: Right Hypochondriac Region | Epigastric Region | Left Hypochondriac Region

    • Middle Row: Right Lumbar Region | Umbilical Region | Left Lumbar Region

    • Bottom Row: Right Iliac Region | Hypogastric Region | Left Iliac Region

Body Planes and Sections

  • Standard Anatomical Planes:

    • Sagittal Plane: Passes vertically through the body, dividing it into right and left portions.

    • Median Plane (Midsagittal Plane): A sagittal plane running directly along the midline, dividing the body into equal left and right halves.

    • Frontal Plane (Coronal Plane): Passes vertically through the body at right angles to the sagittal plane, dividing it into anterior (front) and posterior (back) sections.

    • Transverse Plane (Horizontal Plane): Passes horizontally through the body, dividing it into superior (top) and inferior (bottom) sections.

    • Oblique Plane: Passes through the body at any angle other than a right angle (9090^\circ).

Body Cavities and Serous Membranes

  • Dorsal Body Cavity:

    • Cranial Cavity: Formed by skull bones; houses the brain.

    • Vertebral Canal: Formed by spinal column bones; houses the spinal cord.

  • Ventral Body Cavity:

    • Subdivided by the muscular diaphragm into two primary regions containing internal viscera:

    • 1. Thoracic Cavity: Bounded by ribs and thoracic walls; subdivided into:

    • Pleural Cavities: Two lateral cavities, each housing a lung.

    • Mediastinum: Central partition containing heart, major blood vessels, thymus, trachea, and esophagus.

    • 2. Abdominopelvic Cavity: Located inferior to the diaphragm; subdivided into:

    • Abdominal Cavity: Superior section housing stomach, intestines, liver, gallbladder, pancreas, and spleen.

    • Pelvic Cavity: Inferior section bounded by pelvic bones; houses urinary bladder, urethra, rectum, and internal reproductive organs.

  • Serous Membranes:

    • Functional Structure: Double-layered membranes covering trunk organs and lining closed body cavities, filled with lubricating fluid to reduce movement friction.

    • Structural Balloon Metaphor:

    • Fist = Internal organ.

    • Inner balloon wall = Visceral serous membrane (directly covers organ surface).

    • Outer balloon wall = Parietal serous membrane (lines cavity walls).

    • Cavity between walls = Filled with lubricating serous fluid secreted by membranes.

  • Specific Body Serous Membranes:

    • Pericardium: Surrounds the heart; contains pericardial fluid inside the pericardial cavity.

    • Pleura: Surrounds each lung and lines the thoracic cavity; contains pleural fluid inside the pleural cavity.

    • Peritoneum: Surrounds abdominal organs and lines the abdominopelvic cavity; contains peritoneal fluid inside the peritoneal cavity.

  • Pathological Inflammation of Serous Membranes:

    • Inflammation triggered by infection, trauma, or disease:

    • Pericarditis: Inflammation of the pericardium.

    • Pleurisy: Inflammation of the pleura.

    • Peritonitis: Inflammation of the peritoneum.