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Matter
Anything that occupies space and has mass
Mass
The amount of material in an object; always constant
Weight
Varies with gravity
Energy
The capacity to do work (put matter into motion); no mass or space
Potential energy
Stored energy (battery)
Kinetic energy
Energy in action
Chemical energy
Potential is stored in forms of bonds between atoms and molecules. Break bonds--release energy, make bond--consume energy
Electrical energy
Movement of charged particles, eg. ions move across membranes
Mechanical energy
Energy that directly moves matter
Radiant (electromagnetic) energy
Energy that travels in waves, such as light detected by eye
Elements
Unique substances that can't be broken down any smaller
Atoms
The building blocks of elements
Atomic structure
Atoms are composed of even smaller particles
Nucleus
Located in center of atom, protons and neutrons
Protons
Positively charged particles
Neutrons
No charge, neutral
Electrons
Negatively charged particles
Underlying principle of chemistry
Opposite charges attract
Ion
a particle that is electrically charged (positive or negative)
Molecule
Combination of 2 or more atoms held together by chemical bond. May be same element or compound of elements
Compound
Combination of 2 or more DIFFERENT atoms held by chemical bond
Mixtures
2 or more components physically mixed together; atoms and molecules don't change as there is no chemical bonding. Can separate out the components.
Types of mixtures
Solutions, colloids, suspensions
Solutions
Homogeneous mixture of 2 or more components, does not scatter light
Solvent
Substance in greatest quantity in a solution
Solute
Substance present in lesser amount in solution
Colloids
Heterogeneous mixtures that appear milky and scatter light
Suspensions
Heterogenous mixtures with particles large enough to settle out if given time. Eg. Sand and water, RBCs.
Mixture v compound
Chemical bonding in compound, not in mixture
Electron shells
The space that electrons occupy
Valence shell
Outermost shell of electrons
Octet rule
Atoms, except hydrogen, want 8 electrons in valence shell
3 types of chemical bonds
Ionic Covalent Hydrogen
Ionic bonds
Occur by the transferring of electrons
Anion
Gains electron, negative charge
Cation
Loses electron, positive charge
Covalent bonds
Occur by sharing electron pairs. Single, double, triple, polar and nonpolar
Non polar compounds
Electrically balanced, co2
Polar compounds
Due to unequal electron sharing,H2O
Chemical equations
Occur when forming or breaking chemical bonds
Reactants
Substances entering reactions
Synthesis reaction
2 small reactants create chemical bonds to form a larger molecule, A + B --) AB
Decomposition reaction
Large reactant breaks bonds to form smaller products, AB --) A + B
Exchange reaction
Decomposition and synthesis. AB + CD --) AD + BC
Oxidation-Reduction
Combination of decomposition and exchange rxns. ELECTRON DONOR IS OXIDIZED BY LOSING AN ELECTRON. Electron acceptor is reduced.
Endergonic reaction
Synthesis rxn, absorbs E
Exergonic reaction
Decomposition rxn, releases E
Factors influencing chemical rxn rates
Temperature, concentration, particle size, catalysts
Catalysts
Increase rate of reaction, but are not consumed.
Inorganic compounds
Lack carbon, except CO2 and CO. Prime inO compounds for life: H2O, Salts, acids/bases
Special characteristics of water
High heat capacity High heat of vaporization Polar/solvent properties Reactivity Cushioning
The high heat capacity of water allows it to do what?
Gives off or takes on much heat before changing temperature
The high heat vaporization of water allows what in the body?
Sweating.
The polar/solvent properties of water allow what?
Can dissolve polar and charged substances, but separate from nonpolar substances.
How does water contribute to reactivity?
Water participates in chemical rxns as a reactant to help break covalent bonds.
How does water provide cushioning?
In the CSF
Examples of salts and what they are
are ionic compounds that dissociate into separate ions in water Separate into cations (positively charged molecules) and anions (negatively charged)
Na+, Ca+, K+, Cl-
Acid
Proton donor, or H+ ion donor, 0-7 pH. Acids release H+ HCl --- H+ + Cl-
Base
Proton acceptor, 7-14 pH. Bases take up H+ NaOH-- Na+ + OH-
NH3 + H+ --> NH4+
Ammonia becomes basic Ammonium ion
pH
Measure of the proton/hydrogen ion concentration in solution The more hydrogen ions in a solution, the more acidic that solution is pH is negative logarithm of [H+] in moles per liter that ranges from 0-14 pH scale is logarithmic, so each pH unit represents a 10-fold difference Example: a pH 5 solution is 10 times more acidic than a pH 6 solution
Neutralization
HCl + NaOH ---> NaCl + HOH (pH2) (pH12)
Organic compounds
All contain carbon
Carbohydrates
CH2O, sugars and starches, cellular fuel that dissolves readily in water. Carbohydrates (CHO) Source of cellular fuel Mono, disaccharides, polysaccharides
Monosaccharides
Glucose, fructose, galactose--simple sugars that are the building blocks of carbs.
Disaccharides
double sugar, joined by covalent bond through dehydration synthesis Glucose + fructose --> sucrose
Maltose
glucose + glucose
Polysaccharides
long chains of simple sugars such as starch
Starch
glucose polymer
lipids
Organics that do not dissolve in water due to nonpolarity
Triglycerides
neutral fats; no charge meaning it won't dissolve in water. most efficient fuel source
Glycerol + Fatty acid
triglyceride
Saturated fat
no double bonds between carbons; harder to metabolize as little access to break carbon bonds
Unsaturated fat
double bonds between carbons, easier to metabolize due to easier access to carbons with more H's out of the way
Polyunsaturated
many C=C bonds, usually every other C group.
More C=C bonds
increases liquidity
Order of metabolism
Glucose Glycogen Polyunsaturated fats Monounsaturated fats Saturated fats
Phospholipids
phosphate group replaces one fatty acid and is able to spin around out of alignment with other 2 fatty acid chains, creating a polar, hydrophilic head and nonpolar, hydrophobic tails.
Steroids
Based on or built from cholesterol. Ex: testosterone, aldosterone, and cell membrane components
Proteins
A long chain of aa connected by peptide covalent bond. Organic molecules that contain C, H, O plus NITROGEN; the "words" built by aa "letters". Contain and nitrogen an sulfur. "large molecules"
Amino acids
building blocks for proteins, contain NITROGEN; the "letters" that build protein "words"
Glycine
simplest amino acid
Peptide bond
covalent bond between amino acids; strong bond
Dehydration synthesis
the acid group of one aa is bonded to the amine group of the next, with the loss of a water molecule, consuming E through an endergonic reaction
Hydrolysis
a reaction in which water is added to a molecule thus effecting its decomposition. Peptide bonds linking amino acids together are broken when water is ADDED to the bond, releasing E through a exergonic reaction
Primary structure
the linear sequence of aa, not subject to heat
Secondary structure
the primary structure of aa twists on itself due to H-bonds; subject to heat
Alpha helix
2* protein structure like a slinky toy, curls
Beta pleated sheet
2* protein structure like pleated ribbon
Tertiary structure
secondary structure folds on itself due to H-bonds; acts differently
Quarternary structure
two or more polypeptides joined by either H or covalent bonds, subject to denaturation
Fibrous proteins
structural proteins such as COLLAGEN and ELASTIN Strandlike, water-insoluble, and stable Most have tertiary or quaternary structure (3-D) Provide mechanical support and tensile strength
Globular proteins
functional proteins such as ANTIBODIES, HORMONES, and ENZYMES Compact, spherical, water-soluble, and sensitive to environmental changes Tertiary or quaternary structure (3-D) Specific functional regions (active sites)
Antibodies
immunity; tag or label foreign substances for other immune cells to attack
Hormones
chemical messengers that bring instruction from one area of the body to another for processes that are usually slow and ongoing, with a need for relative stability. Affect the CNS.
Enzymes
Biological catalysts that speed up rxns about 1 million x. Carbonic anhydrase globular proteins that act as biological catalysts Catalysts regulate and increase speed of chemical reactions without getting used up in the process Lower the energy needed to initiate a chemical reaction Leads to an increase in the speed of a reaction Allows for millions of reactions per minute!
Protein denaturation
Acid or heat (usually) will break H-bonds, causing structure to fall apart. Affects 2-4* structures.
Enzymes and protein denaturation
Enzyme very specific to protein, if structure changes enzyme cannot fit.
Enzymes are always....
a protein.
Enzyme names
end in "ase"