a generalized system of observation and inference of the natural world
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plankton
organisms that live suspended in water
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nekton
larger animals that swim in the water column, can move against a current or in turbulent water
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inference
using some premise or logic to generate a prediction of conclusions
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epifauna
animals that live on the seabed surface
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infauna
animals that live in the seabed surface
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what is hypothesis testing?
using experiments or observations to produce an outcome that shows the hypothesis is false, most powerful when specific predictions for an experimental treatment can be contrasted with difference from a control
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hypothesis
a statement that can be tested
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what are the major equipment used to study the oceans?
research vessels, sampling equipment (nets, dredges, etc.), remote sensing by satellite imaging, submarines, remotely operated vehicles, autonomous underwater vehicles, scuba equipment, gps systems with video
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who are the major historical figures in marine biology and why are they important?
linneaus: developed modern means of naming species, described hundreds of animal and plant species
edward forbes: naturalist on the *Beacon* (Mediterranean Sea) found that # of creatures decreased with increasing depth, azoic theory: no life below 1800 ft., different species live at different depths
michael sars: disproved azoic theory in Norwegian fjords, first plankton net
charles darwin: formed theory on development of coral reefs (reefs developed around emergent rock that was sinking)
john murray: *Challenger* expedition, circumnavigated the globe and provided 1st global perspective of ocean diversity, sampled all seas except arctic
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intertidal zone
highest and lowest extent of the tides
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subtidal zone
below intertidal, remainder of seabed
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epipelagic zone
upper 200 m of water
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mesopelagic zone
200m -1000m
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bathypelagic zone
1000m - 4000m
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abyssopelagic zone
4000m - 6000m
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hadal environements
seabed and waters at bottom of trenches, often >6000m
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salinity
grams of dissolved salts per 1000g seawater
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salinity in open ocean
\~35 0/00
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amplitude
height from neutral to crest of wave
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wave length
distance between successive crests
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spring tide
gravitational force of the sun amplifies that of the moon, maximum tidal range is acheived
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coriolis effect
movement of fluids in relation to earth’s rotation beneath, results in deflections
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neap tide
when sun, earth, moon form a right angle at times of quarter moon, results in minimum vertical tide range
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gyres
large system of rotating ocean currents (ex: gulf stream)
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estuary
body of water where freshwater source from land mixes with seawater, often results in strong salinity gradient
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what affects the marginal seas?
marginal seas: restricted connections w/ open ocean + shallow depths
affected by: local climates excessively
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what are some major topographic features of the sea floor?
continental shelf (1deg slope)
continental slope (2.9deg slope)
continental rise
abyssal plain
submarine canyons
oceanic ridge systems
volcanic islands
trenches
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What are some major properties of seawater?
\-hydrogen bonds
\-high heat capacity: can absorb significant heat
\-high latent heat of evap: lot of energy to change to gas
\-high latent heat of melting: lot of energy to change to liquid
increases with increasing salinity and decreasing temperature
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continental drift
continents move along with spreading crust during seafloor spreading, leads to different arrangements of continents
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how do waves form?
wind moves over water and sets up a series of wave patterns, which cause oscillatory water motion
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how are tides formed? what is the stronger influence on them?
gravitational effects of the moon and sun, modulated by earth’s rotation and basin shape
* moon has stronger influence, closer to earth
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ecology
study of interactions between organisms and their environment
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inducible defenses
prey deploy defense structures when predators are present
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optimal foraging theory
decision “rules” a predator should use to optimize food
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diet breadth model
rule: food scace, increase breadth
food plentiful, specialize in high quality food
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time in path model
rule: greater distance between patches, spend more time in given patch
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parasitism
one species lives at expense of the other
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mutualism
evolved association where all species benefit
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commensalism
only one species benefits, other unaffected
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amensilism
one is harmed, other is unaffected
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polymorphism
variation that is discreetly different
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phenotype
form an organism takes
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fitness
relative survival and reproduction of a given genotype
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adaptation
occurs when natural selection causes an evolutionary change, increased survival/performance
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metapopulation
interconnected group of subpopulations
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foundation species
contribute to structure of local habitat and determine physical/chemical properties
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competition
2 individuals of same or different species exploit a common limiting resource
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competitive displacement
one species outcompetes another for a resource
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coexistence
2 species exploit different resources, process allows 2 species to exploit same resource w/out displacement
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disturbance
change in environment (usually physical) that causes mortality or affects reproduction
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succession
predictable order of appearance and dominance of species, usually following disturbance
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top-down processes
top predators have strong effects on food webs
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bottom up processes\`
changes in primary production drive changes in food web
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genotype
genes that control a trait
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phenotypic variation
variation explained by genetic factors+variation from environmental factors+interaction between the 2
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natural selection
selection of certain traits by fitter members reproducing more frequently
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phenotypic plasticity
ability of single genotype to develop different forms, usually in response to environment
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biotic vs. abiotic factors
biotic: living factors
abiotic: nonliving factors
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what is the ecological hierarchy? largest → smallest
biosphere - ecosystem - community - population - organism
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how are organisms distributed on a small scale? give an example
organisms have an ecological niche - range of environments over which a species is found, includes both biological and physicochemical dimensions (interacting species, water depth range, salinity range)
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what are the consequences of competition?
extinction: usually local, habitat shift
coexistence: niche shift, character displacement, or evolution or shift in morphology/behavior
variable environment: unstable but can permit coexistence
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why do we not see climax state in the marine environment?
major external disturbances or differences in time of year may cause major shifts from one community condition to another
compare and contrast competitive displacement with coexistence
similar: result of competition for the same resource (habitat, food, etc.)
different: coexistence has no displacement
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compare and contrast inference competition with exploitation competition
similar: types of competition for the same resource
differences: interference → less direct (one species overgrows another, interspecific territoriality, agonistic interaction)
exploitation/scramble → more direct, one species is just “better” (one species eats a prey resource more efficiently than another)
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what is the intermediate disturbance-predation hypothesis? what happens under low/med/high levels of disturbance or predation? what level promotes coexistence and higher biodiversity?
low levels of disturbance/predation: competitive dominant species takes over
intermediate levels: promotes coexistence, more species present, highest level of coexistence and biodiversity
high levels: most individuals removed, reduces total number of species
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what is succession? give detailed example
predictable order of appearance and dominance of species, usually following a disturbance
early species modify unoccupied habitat, which facilitates later colonization → inevitable colonization of successively competitively superior species, following initial community
example: volcano erupts, lava melts and leaves blank are with no plants → coral is deposited and begins to grow on the rocks → continues to grow and spaw, stacks to create a reef
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compare top down and bottom up food web processes. give example of each
top down: top predators have strong effects
example: apex predator is hunted to extinction, initiates a trophic cascade
bottom up: changes in primary production drive food web changes
example: large scale increase in phytoplankton productivity, allows greater food input, increases populations of apex predators
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acclimation
change of function and tolerance that results in an equilibration with new conditions
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regulation
maintaining consistency of a parameter inside the body
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conformance
changing internal parameters to conform to environmental conditions
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scope for growth
difference between the amount of energy assimilated from animal’s food and cost of metabolism
positive: energy available for growth + reproduction
negative: energy will lose weight, etc.
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aerobic scope
difference between regular metabolism and maximal (active) metabolism
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homeotherm
regulates body temperature (warm-blooded)
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poikilotherm
temperature varies with external temperature (cold-blooded)
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ectotherm
body temperature matches external temperature, metabolic heat is lost to environment
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endotherm
internal temperature greater than external temperature, metabolic heat is reatained
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countercurrent exchange
some heat is lost and then regained during circulation
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osmosis
movement of pure water across a membrane permeable to water (movement of pure water)
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diffusion
random movement of dissolved substances across a permeable membrane (movement of solute)
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bioluminescence
organisms that can produce their own light
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what are some examples of adaptive responses?
behavioral responses
gene regulation: activation of genes, pathways
biochemical: changes of concentrations of enzymes, ions within specific cell types
physiological: cellular changes
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compare and contrast scope for growth vs. aerobic scope
same: both can impact growth and metabolism, both require excess food, increase in relation to each other
different: growth is based on food beyond cost of metabolism, aerobic is based on need of food for activity as well as other resources/factors (oxygen/temperature)
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how does temperature vary in marine environments?
latitude gradient, regional differences
seasonal temperature changes
short term changes: weather changes, tidal changes
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compare pros and cons of poikilotherms vs. homeotherms
homeotherms: regulation
* pros: constancy, high rate of cellular chemical reactions * cons: heat loss
poikilotherms: conformance
* pros: no cost of keeping temperature constant and high * cons: loss of metabolic efficiency
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describe the function of glycoproteins and glycopeptides
function as antifreeze, low concentrations so no effect on osmotic pressure, bind to incipient ice crystals to prevent them from growing
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how does salinity vary in the marine environment?
varies in estuaries, tide pools, melting of sea ice, rainfall, etc.
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what are some habitats with potentially low oxygen?
low tidal zones, within sediment layers, in the oxygen minimum layer, seasonal hypoxic zones due to algal blooms/eutrophication etc.
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what factors cause oxygen consumption to increase?
increasing body mass, activity, metabolic rate
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what are the two primary retinal cells and how do each function?
rods and cones
rods: low light intensity vision, more sensitive but do not discriminate wavelengths
cones: higher resolution, color vision, function only in bright light
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what are methods homeotherms use to maintain body temperature?
insulation: blubber, feathers
countercurrent heat exchange: circulating venous and arterial blood in opposite directions while vessels are in contact to reduce heat loss
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what is limited in high and low latitudes in each season?
high latitudes (coldest):
* winter: survival * summer: reproduction
lowest latitudes (warmest):
* winter: reproduction * summer: survival
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what happens when an organism is in a hypotonic solution? hypertonic solution? isotonic solution?
hypotonic: cell swells, water is absorbed by the cell
hypertonic: cell shrinks, water is lost by the cell (absorbed by surroundings)
isotonic: cell remains same size/shape, water flow is at equlibrium
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what are some mechanisms that organisms use to take up oxygen?
small/thin organisms use diffusion
fish use gills (high surface area to absorb O2)
mammals use lungs w/ enormous surface area
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describe the bohr effect
lowering the pH of the blood/fluids shifts the oxygen dissociation curve to the right
* hemoglobin ability to hold oxygen decreases with decreasing pH * pH is lower near capillaries that are starved for oxygen, CO2 is released from cells, hemoglobin releases oxygen that diffuses into the cells
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describe the eye of a fish
fish eyes use a lens/series of lenses to focus light gathered by the eye. lens consists of material of increasing density toward the center, allows lens to bend light and focus an image. fish have muscles that move the lens back and forth to adjust for focus