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What is the general principles of microbial pathogenesis?
Entry
Adhesion
Invasion
Propagation
Damage
Exit
How are most pathogens transmitted?
From person to person by:
Respiratory
Fecal-oral
Sexual routes
What are some examples of respiratory (aerosolized) viruses/bacteria?
Influenza virus
M. tuberculosis and varicella-zoster virus
What are some examples of enteric pathogens: fecal-oral route?
Hepatitis A and E virus (HAV, HEV)
Poliovirus
Rotavirus
V. Cholera
Shigella spp.
C. jejuni
S. enterica
Hookworm, schistosomes
What are some examples of sexually transmitted: mucosal contact?
Virus → Herpes simplex virus (HSV), HIV, human papillomavirus (HPV)
Bacteria → Treponema pallidum, Neisseria gonorrhoeae
Protozoa → Trichomonas vaginalis
Arthropods → Phthisis pubic, lice
What is virulence?
A pathogen’s relative capacity or degree to overcome a host’s immune defense and cause disease
What does virulence relate to?
To the ability to adhere to:
Host cells
Invade cells and tissues
Deliver toxins
What is bacteremia?
Bacteria in the blood
What is the difference between bacteremia and septicemia?
One is bacteria in the blood
The other is sustained bloodstream invasion and dissemination of pathogens
How does septicemia manifest?
Fever
Low arterial pressure
Other signs/symptoms of sepsis
What are some examples of septicemia?
Viremia
Bacteremia
Fungemia
Parasitemia
What will happen if septicemia is allowed to progress?
The organism may multiply and cause DIC with widespread hemorrhage and thrombi
What are the major categories of infectious agents?
Virus
Bacteria
Fungi
Parasites (protozoa and helminths)
Which patients are most susceptible to severe opportunistic infections?
HIV/AIDS
Transplant recipients
Chemotherapy patients
Steroid users
Congenital immunodeficiency
What are opportunistic organisms?
Organisms that can cause disease in immunocompromised individuals but not in people with an intact immune system
The most devastating immunodeficiency is that caused by infection with HIV
What are some examples that can increase the susceptibility to opportunistic organisms?
Leukemia – suppresses bone marrow function
Immunosuppressive drugs
Aspergillus spp. and Pseudomonas spp.
Decline in immune response – reactivation of latent infection
Herpesviruses and M. tuberculosis
Cystic fibrosis
Pseudomonas aeruginosa and Burkholderia cepacian
Sickle cell disease
P. aeruginosa
Age-related decline and malnutrition
What is the mechanisms of injury of a virus?
Directly damage host cells by entering them and replicating at the hosts expense
Direct cytopathic effects, antiviral immune responses, and transformation of infected cells
What is tropism?
Predilection for viruses to infect certain cells and not others
What is a major determinate of tissue tropism?
The presence of viral receptors on host cells
What is the mechanisms of injury of bacteria?
Pathogenic bacteria have virulence genes that encode proteins responsible for key bacterial properties
Adhesins and pili
Bacterial endotoxin and exotoxins delivery
What does it mean when a patient is more virulent?
They have less chance for transmission
What is a common pathogenesis for a suppurative (purulent) infection?
Formation of “pus”
What highlighted viral species affect the digestive system?
Mumps
Hepatitis B
What highlighted viral species is systemic with skin eruptions?
Measles
Rubella
Varicella-zoster
HSV 1/2
What highlighted viral species is systemic with hematologic disorders
Cytomegalovirus
EBV
HIV 1/2
What highlighted viral species inflict arboviral and hemorrhagic fevers?
Dengue virus 1-4
Yellow fever
What highlighted viral species affects the central nerve system?
Poliovirus
Which viral species is associated with skin/genital warts?
Human papillomavirus
Which virus is the leading cause of vaccine-preventable death and illness worldwide?
Measles
What type of individuals often experience severe cases of measles?
Immunocompromised individuals
How does the T-cell immune system respond to measles?
Distinct skin exanthem
Diffuse, blotchy reddish-brown rash
Face, trunk, proximal extremities
Ulcerated mucosal lesions (oral cavity)
Necrosis
Exudate
How is measles transmitted?
Via respiratory droplets
What are the major surface cell receptors in measles?
CD46
SLAM
Nectin
What is the life cycle of measles?
Initially multiples in respiratory tract
Spreads to local lymphoid tissue
Later disseminates:
Lymphoid
Blood vessels
What cells are commonly seen in measles?
Warthin-Finkeldey (WF) cells
What virus causes measles?
Measles virus (a paramyxovirus)
What are the 3 C’s of measles?
Cough
Coryza (runny nose)
Conjunctivitis
What are Koplik spots?
Small white lesions on the buccal mucosa that appear before the rash and are pathognomonic for measles
What serious CNS complication can occur years after measles infection?
Subacute sclerosing panencephalitis (SSPE)
What vitamin deficiency worsens measles severity?
Vitamin A deficiency
What virus causes mumps?
Mumps virus (a paramyxovirus)
Acute, systemic viral infections
What is the classic clinical manifestation of mumps?
Parotitis (painful swelling of the parotid gland)
Usually bilateral (70%)
Infect salivary gland epithelial cells
What salivary gland is most commonly affected?
Parotid gland
How is mumps transmitted?
Via respiratory droplets
What are the gross features of affect glands in mumps?
Enlarged
Doughy
Moist
Glistening
Reddish-brown
What is the life cycle of mumps?
Spread to draining LNs
Replicate in lymphocytes
Spread in blood to other organs/glands
Which organs/glands are commonly affected by mumps?
Testis → Atrophy,, infertility
Ovary → Infertility
Pancreas
CSN (aseptic meningitis)
What histologic findings may be seen in mumps parotitis?
Mononuclear inflammatory infiltrates
Edema
Acinar cell necrosis
How is poliovirus transmitted?
Fecal-oral route (CD155)
How does polio manifest?
Mild, self-limited infection to paralysis of limb and respiratory muscles
What cells cause paralysis in poliomyelitis?
Motor neurons of the spinal cord and brainstem
What is the life cycle of poliovirus?
Replicates in mucosa (pharynx, tonsil, Peyer’s patches)
Spreads via lymphatics → LNs → Blood
Replicates in motor neurons (spinal cord, brainstem)
What type of virus is West Nile virus?
Arbovirus (Flavivirus)
Most patients with West Nile virus develop what type of illness?
Asymptomatic or mild self-limited infection
Maculopapular rash, petechiae
What type of complications make but 1.5% of West Nile virus cases?
CNS complications
Meningitis
Encephalitis
Meningoencephalitis
What is the life cycle of West Nile Virus?
Replicates in skin dendritic cells
Migrate to LNs
Enter bloodstream and cross blood-brain barrier
How is West Nile Virus transmitted?
Arthropod-borne virus (mosquito vector, bird amplifier host)
Who are the discussed “dead end” hosts of West Nile virus?
Horses
Humans
How is viral hemorrhagic fever transmitted?
Via animal or insect host
Mosquitoes
Person-to-person common with Ebola
How does the mild acute form of viral hemorrhagic fever present?
Fever
Headache
Myalgia
Rash
Neutropenia
Thrombocytopenia
How does the severe and life-threatening form of viral hemorrhagic fever present?
Sudden hemodynamic deterioration and shock
Petechiae
Hemorrhage
Necrosis
What are the different types of enveloped RNA viruses of viral hemorrhagic fever and their associated illnesses?
Adenoviridae → Lassa
Filoviridae → Ebola
Flaviviridae → Dengue, Yellow yellow
Bunyaviridae → Hantavirus
How is zika virus transmitted?
Transmission via mosquitoes
Perinatal transmission
Infect through blood and sexual contact
How does zika virus manifest in adults?
Mild and nonspecific
Fever
Myalgia
Arthralgia
Conjunctivitis
Maculopapular rash lasting a few days to 1 weeks
What kind of complication can a small number of zika virus infected adults develop?
Neurologic complications
Guillain-Barre syndrome
How does zika virus manifest in prenatal cases?
Fetal death
Moderate severe brain defects
Fetus
Newborn child
Calcification
Atrophy
Hypoplasia
Which receptor does SARS-CoV-2 use to enter cells?
ACE2 receptor
What inflammatory cytokines are strongly associated with severe COVID-19?
IL-6
TNF-α
What pediatric syndrome is associated with COVID-19?
MIS-C (Multisystem Inflammatory Syndrome in Children)
How is COVID-19 transmitted?
Respiratory droplets
Aerosolization
How does COVID-19 manifest as?
Fatigue
Weakness
Dyspnea
Chest pain
Cough
What phycological symptoms present with COVID-19?
PTSD
Memory or concentration problems
Anxiety
Depression
How are poxvirus transmitted?
Transmitted via:
Bodily fluids
Mucosal membranes
Respiratory droplets
Infected animals
Contaminated objects
Vertical transmission transplacentally or during birth
What are some animal reservoir for poxvirus?
Squirrels
Gambian rats
Dormice
Monkeys
What variola virus is poxvirus 96% similar to?
Smallpox (Orthopoxvirus)
What are common histologically presentations of poxvirus?
Guarnieri bodies
Ground glass keratinocyte nuclei with basophilic halo and multinucleation
What is the common progression of poxvirus lesion?
Macules → Papules → Vesicles → Pustules → Ulcers
What are classic clinical manifestations of HSV?
Fever blisters, cold sores
Gingivostomatitis
Genital herpes
Corneal lesions
Disseminated
Herpes esophagitis
Herpes bronchopneumonia
Herpes hepatitis
Where does HSV establish latency?
Sensory neurons
How is HSV-1 and HSV-2 distinguished?
Genetically similar
Serologically different
Where does HSV replicate?
The skin and the mucous membranes
Usually, oropharynx or genitals
What histologic findings are classic for HSV?
Cell fusion → Inclusion-bearing multinucleated syncytia
Glassy pink to purple coloration
Chromatin margination
What form of HSV is commonly associated with oral herpes?
HSV-1
What form of HSV is commonly associated with genital herpes and vertical transmission through the birth canal?
HSV-2
What disease results from primary varicella zoster virus infection?
Chickenpox (varicella)
Which group is affect by chickenpox (varicella)?
Mild in children
Severe in adults and immunocompromised
What disease results from varicella zoster virus reactivation?
Shingles (herpes zoster)
What lesion description is classic for chickenpox?
"Dewdrop on a rose petal"
Macules to papules
What are common presentations of shingles (herpes zoster)?
Vesicular lesions
Itching, burning, and sharp pain
How is varicella zoster virus transmitted?
Via aerosols, disseminates hematogenously, causes widespread vesicular lesions
Infects skin/mucous membranes and associated neurons
What histologic finding is pathognomonic for cytomegalovirus?
Owl-eye inclusions
What determines the severity of disease manifestation of cytomegalovirus?
Host immune status and age
What cells are infected in cytomegalovirus?
Monocytes and their bone marrow progenitors
Congenital CMV causes what triad?
Microcephaly
Periventricular calcifications
Hearing loss (high-yield addition)
How is cytomegalovirus transmitted?
Via transplacental, neonatal, saliva, genital, organ transplants, and blood transfusion
What are the clinical presentation for congenital: in-utero transmission CMV?
Cytomegalic inclusion disease
IUGR
Jaundice
Hepatosplenomegaly
Anemia
Thrombocytopenia
Encephalitis
Microcephaly with foci of calcification (fatal)
What are the clinical presentation for perinatal (vertical or breast milk transmission) CMV?
Mostly asymptomatic by shed virus for month the years
Interstitial pneumonitis
What are the clinical presentation for mononucleosis CMV?
Fever
Atypical lymphocytosis, lymphadenopathy
Hepatitis, marked hepatomegaly
What are the clinical presentation for immunosuppressed (HIV, transplant) CMV?
Severe primary infections
Severe latent infections
Primarily effects lung, can progress to ARDS
Necrosis of intestine and lung
What disease is classically associated with EBV?
Infectious mononucleosis